RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 TBCDQ9BTW9 1192 aa19.72■□□□□ 0.75
CDKN3-204ENST00000442975 SORBS1Q9BX66 1292 aaKnown RBP19.72■□□□□ 0.75
CDKN3-204ENST00000442975 DMRT3Q9NQL9 472 aa19.72■□□□□ 0.75
CDKN3-204ENST00000442975 PRDM7Q9NQW5 492 aa19.72■□□□□ 0.75
CDKN3-204ENST00000442975 OLAHQ9NV23 265 aa19.72■□□□□ 0.75
CDKN3-204ENST00000442975 SPACA6W5XKT8 324 aa19.72■□□□□ 0.75
CDKN3-204ENST00000442975 E2F3O00716 465 aa19.71■□□□□ 0.75
CDKN3-204ENST00000442975 PRAMEF2O60811 474 aa19.71■□□□□ 0.75
CDKN3-204ENST00000442975 CBX6O95503 412 aa19.71■□□□□ 0.75
CDKN3-204ENST00000442975 COL6A2P12110 1019 aa19.71■□□□□ 0.75
CDKN3-204ENST00000442975 HIST1H1TP22492 207 aaPredicted RBP19.71■□□□□ 0.75
CDKN3-204ENST00000442975 ATP5A1P25705 553 aaKnown RBP19.71■□□□□ 0.75
CDKN3-204ENST00000442975 HSD17B7P56937 341 aa19.71■□□□□ 0.75
CDKN3-204ENST00000442975 OC90Q02509 493 aaPredicted RBP19.71■□□□□ 0.75
CDKN3-204ENST00000442975 PCDH1Q08174 1060 aa19.71■□□□□ 0.75
CDKN3-204ENST00000442975 AP5B1Q2VPB7 878 aa19.71■□□□□ 0.75
CDKN3-204ENST00000442975 LIPJQ5W064 366 aa19.71■□□□□ 0.75
CDKN3-204ENST00000442975 ACOT4Q8N9L9 421 aa19.71■□□□□ 0.75
CDKN3-204ENST00000442975 ATP6V1E2Q96A05 226 aa19.71■□□□□ 0.75
CDKN3-204ENST00000442975 REPS1Q96D71 796 aa19.71■□□□□ 0.75
CDKN3-204ENST00000442975 CDK15Q96Q40 435 aa19.71■□□□□ 0.75
CDKN3-204ENST00000442975 NPAS2Q99743 824 aa19.71■□□□□ 0.75
CDKN3-204ENST00000442975 UTP23Q9BRU9 249 aaKnown RBP19.71■□□□□ 0.75
CDKN3-204ENST00000442975 MRPL46Q9H2W6 279 aaKnown RBP19.71■□□□□ 0.75
CDKN3-204ENST00000442975 NOL11Q9H8H0 719 aaKnown RBP19.71■□□□□ 0.75
CDKN3-204ENST00000442975 TMCO1Q9UM00 188 aa19.71■□□□□ 0.75
CDKN3-204ENST00000442975 PCDHGA11Q9Y5H2 935 aa19.71■□□□□ 0.75
CDKN3-204ENST00000442975 TRBV11-1A0A0K0K1C0 115 aa19.7■□□□□ 0.74
CDKN3-204ENST00000442975 GABRR3A8MPY1 467 aa19.7■□□□□ 0.74
CDKN3-204ENST00000442975 TGFBR3LH3BV60 316 aa19.7■□□□□ 0.74
CDKN3-204ENST00000442975 IFNA16P05015 189 aa19.7■□□□□ 0.74
CDKN3-204ENST00000442975 GCAP28676 217 aa19.7■□□□□ 0.74
CDKN3-204ENST00000442975 RPS13P62277 151 aaKnown RBP19.7■□□□□ 0.74
CDKN3-204ENST00000442975 TUBA3CQ13748 450 aa19.7■□□□□ 0.74
CDKN3-204ENST00000442975 INAQ16352 499 aa19.7■□□□□ 0.74
CDKN3-204ENST00000442975 H3F3CQ6NXT2 135 aa19.7■□□□□ 0.74
CDKN3-204ENST00000442975 TUBA3EQ6PEY2 450 aa19.7■□□□□ 0.74
CDKN3-204ENST00000442975 ELP5Q8TE02 316 aa19.7■□□□□ 0.74
CDKN3-204ENST00000442975 FAR1Q8WVX9 515 aa19.7■□□□□ 0.74
CDKN3-204ENST00000442975 BARD1Q99728 777 aaKnown RBP19.7■□□□□ 0.74
CDKN3-204ENST00000442975 MAPKAP1Q9BPZ7 522 aa19.7■□□□□ 0.74
CDKN3-204ENST00000442975 MRPL57Q9BQC6 102 aaKnown RBP19.7■□□□□ 0.74
CDKN3-204ENST00000442975 CDCP1Q9H5V8 836 aa19.7■□□□□ 0.74
CDKN3-204ENST00000442975 LYRM4Q9HD34 91 aa19.7■□□□□ 0.74
CDKN3-204ENST00000442975 ADGRE2Q9UHX3 823 aa19.7■□□□□ 0.74
CDKN3-204ENST00000442975 PCTPQ9UKL6 214 aa19.7■□□□□ 0.74
CDKN3-204ENST00000442975 FBXW2Q9UKT8 454 aa19.7■□□□□ 0.74
CDKN3-204ENST00000442975 RNF11Q9Y3C5 154 aa19.7■□□□□ 0.74
CDKN3-204ENST00000442975 PTPN13Q12923 2485 aa19.7■□□□□ 0.74
CDKN3-204ENST00000442975 DOCK10Q96BY6 2186 aa19.7■□□□□ 0.74
CDKN3-204ENST00000442975 USP9XQ93008 2570 aaPredicted RBP19.69■□□□□ 0.74
CDKN3-204ENST00000442975 SHANK1Q9Y566 2161 aa19.69■□□□□ 0.74
CDKN3-204ENST00000442975 MYOCOSA0A1B0GUC4 107 aa19.69■□□□□ 0.74
CDKN3-204ENST00000442975 STX16-NPEPL1H3BU86 382 aa19.69■□□□□ 0.74
CDKN3-204ENST00000442975 CYR61O00622 381 aa19.69■□□□□ 0.74
CDKN3-204ENST00000442975 STX16O14662 325 aa19.69■□□□□ 0.74
CDKN3-204ENST00000442975 UGDHO60701 494 aa19.69■□□□□ 0.74
CDKN3-204ENST00000442975 SEMA7AO75326 666 aa19.69■□□□□ 0.74
CDKN3-204ENST00000442975 MYBL2P10244 700 aa19.69■□□□□ 0.74
CDKN3-204ENST00000442975 PIK3CBP42338 1070 aa19.69■□□□□ 0.74
CDKN3-204ENST00000442975 CCNG1P51959 295 aa19.69■□□□□ 0.74
CDKN3-204ENST00000442975 STX4Q12846 297 aa19.69■□□□□ 0.74
CDKN3-204ENST00000442975 OR1C1Q15619 314 aa19.69■□□□□ 0.74
CDKN3-204ENST00000442975 ZNF766Q5HY98 468 aa19.69■□□□□ 0.74
CDKN3-204ENST00000442975 RPUSD3Q6P087 351 aaKnown RBP19.69■□□□□ 0.74
CDKN3-204ENST00000442975 METTL2BQ6P1Q9 378 aaKnown RBP19.69■□□□□ 0.74
CDKN3-204ENST00000442975 RPS19BP1Q86WX3 136 aaKnown RBP19.69■□□□□ 0.74
CDKN3-204ENST00000442975 ST6GALNAC3Q8NDV1 305 aa19.69■□□□□ 0.74
CDKN3-204ENST00000442975 B3GNT7Q8NFL0 401 aa19.69■□□□□ 0.74
CDKN3-204ENST00000442975 OR52B6Q8NGF0 335 aa19.69■□□□□ 0.74
CDKN3-204ENST00000442975 MTBPQ96DY7 904 aa19.69■□□□□ 0.74
CDKN3-204ENST00000442975 NSUN5Q96P11 429 aaKnown RBP19.69■□□□□ 0.74
CDKN3-204ENST00000442975 TAAR6Q96RI8 345 aa19.69■□□□□ 0.74
CDKN3-204ENST00000442975 DEFB126Q9BYW3 111 aa19.69■□□□□ 0.74
CDKN3-204ENST00000442975 ADAP2Q9NPF8 381 aa19.69■□□□□ 0.74
CDKN3-204ENST00000442975 KLHL1Q9NR64 748 aa19.69■□□□□ 0.74
CDKN3-204ENST00000442975 BLACEA4D250 179 aa19.68■□□□□ 0.74
CDKN3-204ENST00000442975 H0YIV9 168 aa19.68■□□□□ 0.74
CDKN3-204ENST00000442975 OR7A17O14581 309 aa19.68■□□□□ 0.74
CDKN3-204ENST00000442975 RASAL1O95294 804 aa19.68■□□□□ 0.74
CDKN3-204ENST00000442975 CLDN9O95484 217 aa19.68■□□□□ 0.74
CDKN3-204ENST00000442975 CPN2P22792 545 aa19.68■□□□□ 0.74
CDKN3-204ENST00000442975 PMP22Q01453 160 aa19.68■□□□□ 0.74
CDKN3-204ENST00000442975 ID2Q02363 134 aa19.68■□□□□ 0.74
CDKN3-204ENST00000442975 SLC29A2Q14542 456 aa19.68■□□□□ 0.74
CDKN3-204ENST00000442975 TERF2Q15554 542 aa19.68■□□□□ 0.74
CDKN3-204ENST00000442975 ZRSR2Q15696 482 aaKnown RBP19.68■□□□□ 0.74
CDKN3-204ENST00000442975 DEPDC1Q5TB30 811 aa19.68■□□□□ 0.74
CDKN3-204ENST00000442975 OR4C11Q6IEV9 310 aa19.68■□□□□ 0.74
CDKN3-204ENST00000442975 LGI4Q8N135 537 aa19.68■□□□□ 0.74
CDKN3-204ENST00000442975 NFAM1Q8NET5 270 aaPredicted RBP19.68■□□□□ 0.74
CDKN3-204ENST00000442975 THAP3Q8WTV1 239 aaPredicted RBP19.68■□□□□ 0.74
CDKN3-204ENST00000442975 RGMAQ96B86 450 aa19.68■□□□□ 0.74
CDKN3-204ENST00000442975 C5orf34Q96MH7 638 aa19.68■□□□□ 0.74
CDKN3-204ENST00000442975 SIGLEC12Q96PQ1 595 aa19.68■□□□□ 0.74
CDKN3-204ENST00000442975 KCMF1Q9P0J7 381 aa19.68■□□□□ 0.74
CDKN3-204ENST00000442975 PSMC3IPQ9P2W1 217 aaPredicted RBP19.68■□□□□ 0.74
CDKN3-204ENST00000442975 CNTRLQ7Z7A1 2325 aa19.68■□□□□ 0.74
CDKN3-204ENST00000442975 IQANK1A0A1B0GTG1 560 aa19.67■□□□□ 0.74
CDKN3-204ENST00000442975 A8MT66 165 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 475.9 ms