RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 DCTN2Q13561 401 aaKnown RBP7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 PAQR3Q6TCH7 311 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 C6orf15Q6UXA7 325 aaPredicted RBP7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 ZBTB49Q6ZSB9 765 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 CALHM3Q86XJ0 350 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 RAB43Q86YS6 212 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 MIER2Q8N344 545 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 SFRP1Q8N474 314 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 AFAP1L2Q8N4X5 818 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 GPBAR1Q8TDU6 330 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 SGCDQ92629 289 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 PDLIM5Q96HC4 596 aaKnown RBP7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 ZNF583Q96ND8 569 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 PAK1IP1Q9NWT1 392 aaPredicted RBP7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 ABI3Q9P2A4 366 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 SLC23A2Q9UGH3 650 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 ZMIZ1Q9ULJ6 1067 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 KLHL20Q9Y2M5 609 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 PTRH2Q9Y3E5 179 aaKnown RBP7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 OR1F1O43749 312 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 SNAP29O95721 258 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 GSTM1P09488 218 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 MAGP20916 626 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 PDHA2P29803 388 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 HSD17B2P37059 387 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 CAPGP40121 348 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 MAGEA8P43361 318 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 ENTPD1P49961 510 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 ERVPABLB-1P60509 514 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 PPP2R2BQ00005 443 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 GSTM4Q03013 218 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 TRA2AQ13595 282 aaKnown RBP eCLIP7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 ZXDCQ2QGD7 858 aaPredicted RBP7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 ZNF551Q7Z340 670 aaPredicted RBP7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 TMPRSS11BQ86T26 416 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 DTWD1Q8N5C7 304 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 FAM86B1Q8N7N1 296 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 LZICQ8WZA0 190 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 HSPBAP1Q96EW2 488 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 AIF1LQ9BQI0 150 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 ALG2Q9H553 416 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 IKZF5Q9H5V7 419 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 ZIM2Q9NZV7 527 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 EGFL7Q9UHF1 273 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 MRPS33Q9Y291 106 aaKnown RBP7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 COL6A3P12111 3177 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 RP1P56715 2156 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 TLCD2A6NGC4 264 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 TTLL8A6PVC2 850 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 MKRN2OSH3BPM6 223 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 CDC7O00311 574 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 EI24O14681 340 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 STATHP02808 62 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 UMPSP11172 480 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 CCL11P51671 97 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 ITGA1P56199 1179 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 TMPRSS3P57727 454 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 INSM1Q01101 510 aaPredicted RBP7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 GRM7Q14831 915 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 TGFBIQ15582 683 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 COLEC12Q5KU26 742 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 SBSNQ6UWP8 590 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 ADAMTSL2Q86TH1 951 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 NLGN4XQ8N0W4 816 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 CLEC1AQ8NC01 280 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 NLGN4YQ8NFZ3 816 aaPredicted RBP7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 VPS33AQ96AX1 596 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 MMABQ96EY8 250 aaPredicted RBP7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 HAUS8Q9BT25 410 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 AMBRA1Q9C0C7 1298 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 CAAP1Q9H8G2 361 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 GORASP2Q9H8Y8 452 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 ANKHQ9HCJ1 492 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 PLSCR2Q9NRY7 297 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 USE1Q9NZ43 259 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 TMEFF2Q9UIK5 374 aaPredicted RBP7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 MAN2B2Q9Y2E5 1009 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 SVILO95425 2214 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 KIAA1549LQ6ZVL6 1849 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 FAM208BQ5VWN6 2430 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 SYCE1LA8MT33 242 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 TAPBPO15533 448 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 STK17BO94768 372 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 WDR47O94967 919 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 CHEK2O96017 543 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 HOXC4P09017 264 aaPredicted RBP7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 LINC00032P0C843 101 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 ACP1P24666 158 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 BNC1Q01954 994 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 MAP7Q14244 749 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 TGIF1Q15583 401 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 CTU2Q2VPK5 515 aaKnown RBP7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 IQCCQ4KMZ1 466 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 PAGE2BQ5JRK9 111 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 FGD3Q5JSP0 725 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 C6orf136Q5SQH8 315 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 LETMD1Q6P1Q0 360 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 B3GNT8Q7Z7M8 397 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 SFTPA2Q8IWL1 248 aa7.04□□□□□ -1.28
CDC42BPA-208ENST00000442054 OR9A1PQ8NGU1 263 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms