RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 PTPRNQ16849 979 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 USP39Q53GS9 565 aaKnown RBP16.09■□□□□ 0.17
PMS1-213ENST00000441310 DDI2Q5TDH0 399 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 ULK4Q96C45 1275 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 PPP1R2P1Q96PQ5 205 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 MS4A7Q9GZW8 240 aaPredicted RBP16.09■□□□□ 0.17
PMS1-213ENST00000441310 IPPKQ9H8X2 491 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 SERHLQ9NQF3 203 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 RPS10-NUDT3A0A1W2PQS6 291 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 C2orf78A6NCI8 922 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 COCHO43405 550 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 NDUFA2O43678 99 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 HOXB6P17509 224 aaKnown RBP16.09■□□□□ 0.17
PMS1-213ENST00000441310 TNFRSF1BP20333 461 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 CRYBB2P43320 205 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 CAV3P56539 151 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 CLDN20P56880 219 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 ABATP80404 500 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 SNAPC1Q16533 368 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 CHMP1BQ7LBR1 199 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 FAM124AQ86V42 546 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 ELAC1Q9H777 363 aaKnown RBP16.09■□□□□ 0.17
PMS1-213ENST00000441310 ISM1B1AKI9 464 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 TNFRSF11BO00300 401 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 HOXB8P17481 243 aaPredicted RBP16.09■□□□□ 0.17
PMS1-213ENST00000441310 GABRB1P18505 474 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 P2RY14Q15391 338 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 LIPKQ5VXJ0 399 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 GPAT4Q86UL3 456 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 OR10G2Q8NGC3 310 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 RBPMSQ93062 196 aaKnown RBP16.09■□□□□ 0.17
PMS1-213ENST00000441310 TSSK3Q96PN8 268 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 ATP13A1Q9HD20 1204 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 SSR3Q9UNL2 185 aa16.09■□□□□ 0.17
PMS1-213ENST00000441310 H7C4K7 107 aa16.08■□□□□ 0.17
PMS1-213ENST00000441310 PROM1O43490 865 aa16.08■□□□□ 0.17
PMS1-213ENST00000441310 RGS14O43566 566 aa16.08■□□□□ 0.17
PMS1-213ENST00000441310 ACSL4O60488 711 aa16.08■□□□□ 0.17
PMS1-213ENST00000441310 NDUFS3O75489 264 aa16.08■□□□□ 0.17
PMS1-213ENST00000441310 GUCA1CO95843 209 aa16.08■□□□□ 0.17
PMS1-213ENST00000441310 PROS1P07225 676 aa16.08■□□□□ 0.17
PMS1-213ENST00000441310 TLE2Q04725 743 aa16.08■□□□□ 0.17
PMS1-213ENST00000441310 GTF2H2Q13888 395 aa16.08■□□□□ 0.17
PMS1-213ENST00000441310 C22orf42Q6IC83 251 aa16.08■□□□□ 0.17
PMS1-213ENST00000441310 GTF2H2CQ6P1K8 395 aa16.08■□□□□ 0.17
PMS1-213ENST00000441310 OTOP2Q7RTS6 562 aa16.08■□□□□ 0.17
PMS1-213ENST00000441310 OR11H4Q8NGC9 324 aa16.08■□□□□ 0.17
PMS1-213ENST00000441310 HERVK_113Q902F9 699 aa16.08■□□□□ 0.17
PMS1-213ENST00000441310 ASIC4Q96FT7 647 aa16.08■□□□□ 0.17
PMS1-213ENST00000441310 CDCA4Q9BXL8 241 aa16.08■□□□□ 0.17
PMS1-213ENST00000441310 KCNH6Q9H252 994 aa16.08■□□□□ 0.17
PMS1-213ENST00000441310 TMCC3Q9ULS5 477 aa16.08■□□□□ 0.17
PMS1-213ENST00000441310 PCDHGA2Q9Y5H1 932 aa16.08■□□□□ 0.17
PMS1-213ENST00000441310 PATJQ8NI35 1801 aa16.08■□□□□ 0.16
PMS1-213ENST00000441310 DRGXA6NNA5 263 aa16.08■□□□□ 0.16
PMS1-213ENST00000441310 E9PQ18 207 aa16.08■□□□□ 0.16
PMS1-213ENST00000441310 PI15O43692 258 aa16.08■□□□□ 0.16
PMS1-213ENST00000441310 KLK8O60259 260 aa16.08■□□□□ 0.16
PMS1-213ENST00000441310 SCG5P05408 212 aa16.08■□□□□ 0.16
PMS1-213ENST00000441310 POU1F1P28069 291 aa16.08■□□□□ 0.16
PMS1-213ENST00000441310 CDKN1CP49918 316 aaPredicted RBP16.08■□□□□ 0.16
PMS1-213ENST00000441310 CLCNKAP51800 687 aa16.08■□□□□ 0.16
PMS1-213ENST00000441310 KCNC3Q14003 757 aa16.08■□□□□ 0.16
PMS1-213ENST00000441310 LRRC32Q14392 662 aa16.08■□□□□ 0.16
PMS1-213ENST00000441310 GPR68Q15743 365 aa16.08■□□□□ 0.16
PMS1-213ENST00000441310 VMACQ2NL98 169 aa16.08■□□□□ 0.16
PMS1-213ENST00000441310 ZNF57Q68EA5 555 aaPredicted RBP16.08■□□□□ 0.16
PMS1-213ENST00000441310 TMEM145Q8NBT3 493 aa16.08■□□□□ 0.16
PMS1-213ENST00000441310 DENND6BQ8NEG7 585 aa16.08■□□□□ 0.16
PMS1-213ENST00000441310 LINC00052Q96N35 136 aa16.08■□□□□ 0.16
PMS1-213ENST00000441310 POLR1EQ9GZS1 481 aaKnown RBP16.08■□□□□ 0.16
PMS1-213ENST00000441310 HEXA-AS1Q9H8Q6 139 aa16.08■□□□□ 0.16
PMS1-213ENST00000441310 PRAMEF33A0A0G2JMD5 474 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 RFXANKO14593 260 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 SEC14L5O43304 696 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 PRAMEF10O60809 474 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 RPP40O75818 363 aaKnown RBP16.07■□□□□ 0.16
PMS1-213ENST00000441310 IGLV3-27P01718 113 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 TPOP07202 933 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 ATXN1LP0C7T5 689 aaKnown RBP16.07■□□□□ 0.16
PMS1-213ENST00000441310 CORO1AP31146 461 aaKnown RBP16.07■□□□□ 0.16
PMS1-213ENST00000441310 ZNF81P51508 661 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 RAB14P61106 215 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 IL10RBQ08334 325 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 PLAG1Q6DJT9 500 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 GPR139Q6DWJ6 353 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 DNAJC5GQ8N7S2 189 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 OR52H1Q8NGJ2 320 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 SPPL2AQ8TCT8 520 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 GIMAP1Q8WWP7 306 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 SLC25A46Q96AG3 418 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 KLHL15Q96M94 604 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 WACQ9BTA9 647 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 CLEC4MQ9H2X3 399 aaPredicted RBP16.07■□□□□ 0.16
PMS1-213ENST00000441310 LRTM1Q9HBL6 345 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 SEC14L4Q9UDX3 406 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 PLEKHB1Q9UF11 243 aaPredicted RBP16.07■□□□□ 0.16
PMS1-213ENST00000441310 STUB1Q9UNE7 303 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 CCL27Q9Y4X3 112 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 PCDHGC4Q9Y5F7 938 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms