RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 DIRAS2Q96HU8 199 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 PANX1Q96RD7 426 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 EGFL8Q99944 293 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 NIPSNAP1Q9BPW8 284 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 DOHHQ9BU89 302 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 SPATA9Q9BWV2 254 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 FAM126AQ9BYI3 521 aaPredicted RBP11.4□□□□□ -0.58
LTBR-203ENST00000441074 SMG9Q9H0W8 520 aaKnown RBP11.4□□□□□ -0.58
LTBR-203ENST00000441074 MRPL17Q9NRX2 175 aaKnown RBP11.4□□□□□ -0.58
LTBR-203ENST00000441074 CLN6Q9NWW5 311 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 WWOXQ9NZC7 414 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 LSM2Q9Y333 95 aaKnown RBP11.4□□□□□ -0.58
LTBR-203ENST00000441074 HYKKA2RU49 373 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 SNTNA6NMZ2 147 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 MAGEB17A8MXT2 336 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 CCNB2O95067 398 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 GSTM1P09488 218 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 CTPS1P17812 591 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 SDC1P18827 310 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 MAP2K3P46734 347 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 RGRP47804 291 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 CRYBA2P53672 197 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 ERVFC1P60507 584 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 CACNG1Q06432 222 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 PYDC2Q56P42 97 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 HSDL2Q6YN16 418 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 ZNF621Q6ZSS3 439 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 DDX53Q86TM3 631 aaKnown RBP11.4□□□□□ -0.59
LTBR-203ENST00000441074 SLC44A2Q8IWA5 706 aaPredicted RBP11.4□□□□□ -0.59
LTBR-203ENST00000441074 LSM14AQ8ND56 463 aaKnown RBP11.4□□□□□ -0.59
LTBR-203ENST00000441074 DUSP18Q8NEJ0 188 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 OR4M2Q8NGB6 313 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 CREB3L4Q8TEY5 395 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 SLC25A46Q96AG3 418 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 NECTIN4Q96NY8 510 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 C17orf62Q9BQA9 187 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 AIFM2Q9BRQ8 373 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 MTIF3Q9H2K0 278 aaKnown RBP11.4□□□□□ -0.59
LTBR-203ENST00000441074 NDUFAF4Q9P032 175 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 SH3BP4Q9P0V3 963 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 SLC23A1Q9UHI7 598 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 HCN4Q9Y3Q4 1203 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 RAI2Q9Y5P3 530 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 AUP1Q9Y679 476 aa11.4□□□□□ -0.59
LTBR-203ENST00000441074 GREB1Q4ZG55 1949 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 GRXCR1A8MXD5 290 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 TMEM229AB2RXF0 380 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 M0R129 80 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 ACSL4O60488 711 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 OR7A10O76100 309 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 LRATO95237 230 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 PDYNP01213 254 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 TSPAN19P0C672 248 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 EPB42P16452 691 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 TGM4P49221 684 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 RAB25P57735 213 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 CYP4F8P98187 520 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 MAB21L1Q13394 359 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 PTCHD3Q3KNS1 767 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 TMC8Q8IU68 726 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 LGI4Q8N135 537 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 C1orf52Q8N6N3 182 aaKnown RBP11.39□□□□□ -0.59
LTBR-203ENST00000441074 CLDN22Q8N7P3 220 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 ARL14EPQ8N8R7 260 aaPredicted RBP11.39□□□□□ -0.59
LTBR-203ENST00000441074 AP2M1Q96CW1 435 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 TRMT61AQ96FX7 289 aaKnown RBP11.39□□□□□ -0.59
LTBR-203ENST00000441074 SPON2Q9BUD6 331 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 C1QTNF7Q9BXJ2 289 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 B3GNT4Q9C0J1 378 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 TRIM45Q9H8W5 580 aaPredicted RBP11.39□□□□□ -0.59
LTBR-203ENST00000441074 STOML2Q9UJZ1 356 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 SLC6A14Q9UN76 642 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 SSR3Q9UNL2 185 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 ZFP37Q9Y6Q3 630 aaPredicted RBP11.39□□□□□ -0.59
LTBR-203ENST00000441074 PCM1Q15154 2024 aa11.39□□□□□ -0.59
LTBR-203ENST00000441074 A0A1W2PQL4 384 aaPredicted RBP11.38□□□□□ -0.59
LTBR-203ENST00000441074 ANKRD66B4E2M5 251 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 MYL12BO14950 172 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 HCN1O60741 890 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 CLDN11O75508 207 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 CLDN9O95484 217 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 IL1AP01583 271 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 HLA-DQB1P01920 261 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 LAG3P18627 525 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 MYL12AP19105 171 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 POU3F3P20264 500 aaPredicted RBP11.38□□□□□ -0.59
LTBR-203ENST00000441074 RPS3P23396 243 aaKnown RBP eCLIP11.38□□□□□ -0.59
LTBR-203ENST00000441074 PRPH2P23942 346 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 CORO1AP31146 461 aaKnown RBP11.38□□□□□ -0.59
LTBR-203ENST00000441074 SOX3P41225 446 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 SLC11A2P49281 568 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 SRSF11Q05519 484 aaKnown RBP11.38□□□□□ -0.59
LTBR-203ENST00000441074 HECTD3Q5T447 861 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 ZNF648Q5T619 568 aaPredicted RBP11.38□□□□□ -0.59
LTBR-203ENST00000441074 ZBTB37Q5TC79 503 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 FAM109BQ6ICB4 259 aaPredicted RBP11.38□□□□□ -0.59
LTBR-203ENST00000441074 MZT2BQ6NZ67 158 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 ZNF782Q6ZMW2 699 aaPredicted RBP11.38□□□□□ -0.59
LTBR-203ENST00000441074 UBE2J2Q8N2K1 259 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 CMTM7Q96FZ5 175 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms