RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 OR4A15Q8NGL6 344 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 SLC9A6Q92581 669 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 KCNJ9Q92806 393 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 CIDECQ96AQ7 238 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-209ENST00000439886 RIPOR3Q96MK2 946 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 NKIRAS2Q9NYR9 191 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 ZNF226Q9NYT6 803 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 SLC23A1Q9UHI7 598 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 ERVW-1Q9UQF0 538 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 TANC1Q9C0D5 1861 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 TEX46H3BTG2 121 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 SYN3O14994 580 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 GREM1O60565 184 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 UGT2B17O75795 530 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 ACVR2AP27037 513 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 MAPK1P28482 360 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 GKP32189 559 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 PTGER3P43115 390 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 MAGEA11P43364 429 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 GSTM5P46439 218 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 CLDN8P56748 225 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 BNC1Q01954 994 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 TAF10Q12962 218 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 MAB21L1Q13394 359 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 CCDC149Q6ZUS6 474 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 ZNF367Q7RTV3 350 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 STX12Q86Y82 276 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 CCDC36Q8IYA8 594 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 TTC9BQ8N6N2 239 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 NLGN4YQ8NFZ3 816 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-209ENST00000439886 NFKBIDQ8NI38 313 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 ZNF431Q8TF32 576 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-209ENST00000439886 TRMT61AQ96FX7 289 aaKnown RBP11.23□□□□□ -0.61
SMPD4-209ENST00000439886 SAMD11Q96NU1 681 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 TMEM121BQ9BXQ6 578 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-209ENST00000439886 BARHL1Q9BZE3 327 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 NPAP1Q9NZP6 1156 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 CACNG2Q9Y698 323 aa11.23□□□□□ -0.61
SMPD4-209ENST00000439886 MYLKQ15746 1914 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 ANKRD66B4E2M5 251 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 PCDH7O60245 1069 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 NCR1O76036 304 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 CSF3P09919 207 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 ZNF140P52738 457 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-209ENST00000439886 RAB14P61106 215 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 RPA4Q13156 261 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 CHIT1Q13231 466 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 NOXRED1Q6NXP6 359 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 DEF8Q6ZN54 512 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 MON1AQ86VX9 555 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 IQCF1Q8N6M8 205 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 C11orf65Q8NCR3 313 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 TMEM80Q96HE8 168 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 RADILQ96JH8 1075 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 ACBD6Q9BR61 282 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 IFT46Q9NQC8 304 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 ACOXLQ9NUZ1 547 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 SLC39A1Q9NY26 324 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 POFUT2Q9Y2G5 429 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 DHRS7Q9Y394 339 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 NEUROG3Q9Y4Z2 214 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 GRXCR2A6NFK2 248 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 ST8SIA5O15466 376 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 PRAMEF12O95522 483 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 ANXA8P13928 327 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 XPAP23025 273 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-209ENST00000439886 ITGA1P56199 1179 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.22□□□□□ -0.61
SMPD4-209ENST00000439886 ZNF79Q15937 498 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 CPTPQ5TA50 214 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 ANKRD54Q6NXT1 300 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 UBE2R2Q712K3 238 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-209ENST00000439886 CHMP1BQ7LBR1 199 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 PM20D2Q8IYS1 436 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 ADGRG2Q8IZP9 1017 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 LRRC17Q8N6Y2 441 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 DNAJC5GQ8N7S2 189 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 DUSP26Q9BV47 211 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 MED28Q9H204 178 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 ANKRA2Q9H9E1 313 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 SERHLQ9NQF3 203 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 TMEM248Q9NWD8 314 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 MAPRE3Q9UPY8 281 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 PRSS21Q9Y6M0 314 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 ZFP37Q9Y6Q3 630 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-209ENST00000439886 COL4A5P29400 1685 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 COL11A2P13942 1736 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-209ENST00000439886 WASHC1A8K0Z3 465 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 LINC00587B1AMM8 73 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 INMT-MINDY4F8WBC2 141 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 TLX2O43763 284 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-209ENST00000439886 RPS12P25398 132 aaKnown RBP11.22□□□□□ -0.61
SMPD4-209ENST00000439886 AVPR1BP47901 424 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 SMSP52788 366 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 RHOAP61586 193 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 CDC42EP1Q00587 391 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 CSTF1Q05048 431 aaKnown RBP11.22□□□□□ -0.61
SMPD4-209ENST00000439886 ATP13A5Q4VNC0 1218 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 IFI44LQ53G44 452 aa11.22□□□□□ -0.61
SMPD4-209ENST00000439886 LRRC73Q5JTD7 316 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms