RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 DYTNA2CJ06 578 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 BLACEA4D250 179 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 SMIM23A6NLE4 172 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 GLRA3O75311 464 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 SLC26A5P58743 744 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 RPS13P62277 151 aaKnown RBP15.25■□□□□ 0.03
SMPD4-207ENST00000435455 CUL3Q13618 768 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 GGTA1PQ4G0N0 100 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 ABHD17BQ5VST6 288 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 FRG2Q64ET8 278 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 TTC19Q6DKK2 380 aaPredicted RBP15.25■□□□□ 0.03
SMPD4-207ENST00000435455 OR4C11Q6IEV9 310 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 MILR1Q7Z6M3 343 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 SCUBE1Q8IWY4 988 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 RNF175Q8N4F7 328 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 FAM47BQ8NA70 645 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 Q8NA96 180 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 MYRIPQ8NFW9 859 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 DNAJB14Q8TBM8 379 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 WDR20Q8TBZ3 569 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 CPT1CQ8TCG5 803 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 EPS8L3Q8TE67 593 aaKnown RBP15.25■□□□□ 0.03
SMPD4-207ENST00000435455 FRG2BQ96QU4 278 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 KCNK13Q9HB14 408 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 MMP25Q9NPA2 562 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 NECTIN3Q9NQS3 549 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 KCMF1Q9P0J7 381 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 LUZP4Q9P127 313 aa15.25■□□□□ 0.03
SMPD4-207ENST00000435455 SAGE2PA6NJ88 616 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 PYCARD-AS1I3L0S3 204 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 SAP18O00422 153 aaKnown RBP15.24■□□□□ 0.03
SMPD4-207ENST00000435455 RTCAO00442 366 aaKnown RBP15.24■□□□□ 0.03
SMPD4-207ENST00000435455 CYR61O00622 381 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 PLPP1O14494 284 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 DLX3O60479 287 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 NUDT17P0C025 328 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 CCT5P48643 541 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 TAS2R50P59544 299 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 KCNC4Q03721 635 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 IFT88Q13099 833 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 SLC13A2Q13183 592 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 TERF2Q15554 542 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 INPP5JQ15735 1006 aaPredicted RBP15.24■□□□□ 0.03
SMPD4-207ENST00000435455 ZNF678Q5SXM1 525 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 H3F3CQ6NXT2 135 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 RIBC1Q8N443 379 aaPredicted RBP15.24■□□□□ 0.03
SMPD4-207ENST00000435455 TMEM52Q8NDY8 209 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 C7orf57Q8NEG2 295 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 OR4F6Q8NGB9 312 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 AENQ8WTP8 325 aaKnown RBP15.24■□□□□ 0.03
SMPD4-207ENST00000435455 HAS2Q92819 552 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 MIB2Q96AX9 1013 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 CCDC126Q96EE4 140 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 ZNF354BQ96LW1 612 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 CDK15Q96Q40 435 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 SERPINI1Q99574 410 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 RNF32Q9H0A6 362 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 GRID1Q9ULK0 1009 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 STK38LQ9Y2H1 464 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 SHANK1Q9Y566 2161 aa15.24■□□□□ 0.03
SMPD4-207ENST00000435455 CTNSO60931 367 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 SUPT7LO94864 414 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 SEMA3DO95025 777 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 IMPDH1P20839 514 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 HNRNPFP52597 415 aaKnown RBP15.23■□□□□ 0.03
SMPD4-207ENST00000435455 PRKAA2P54646 552 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 CDH13P55290 713 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 ARG2P78540 354 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 CLCQ05315 142 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 ZNF33BQ06732 778 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 IFFO1Q0D2I5 559 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 TLR1Q15399 786 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 IGFBP7Q16270 282 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 CCDC153Q494R4 210 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 B3GNTL1Q67FW5 361 aaPredicted RBP15.23■□□□□ 0.03
SMPD4-207ENST00000435455 SH2D5Q6ZV89 423 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 RPS27LQ71UM5 84 aaKnown RBP15.23■□□□□ 0.03
SMPD4-207ENST00000435455 CUZD1Q86UP6 607 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 ATCAYQ86WG3 371 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 ZCCHC7Q8N3Z6 543 aaKnown RBP15.23■□□□□ 0.03
SMPD4-207ENST00000435455 CAVIN3Q969G5 261 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 CNDP1Q96KN2 507 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 CSF3RQ99062 836 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 MAPKAP1Q9BPZ7 522 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 ELOVL6Q9H5J4 265 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 CLMPQ9H6B4 373 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 MS4A12Q9NXJ0 267 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 ABI3Q9P2A4 366 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.23■□□□□ 0.03
SMPD4-207ENST00000435455 TRPS1Q9UHF7 1281 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 PHF11Q9UIL8 331 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 SNX6Q9UNH7 406 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 PLAAQ9Y263 795 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 CSAG2Q9Y5P2 127 aa15.23■□□□□ 0.03
SMPD4-207ENST00000435455 V9GYY5 206 aaPredicted RBP15.23■□□□□ 0.03
SMPD4-207ENST00000435455 SPENQ96T58 3664 aaKnown RBP15.22■□□□□ 0.03
SMPD4-207ENST00000435455 TLDC2A0PJX2 215 aa15.22■□□□□ 0.03
SMPD4-207ENST00000435455 A8MUI8 341 aa15.22■□□□□ 0.03
SMPD4-207ENST00000435455 FOXO6A8MYZ6 492 aa15.22■□□□□ 0.03
SMPD4-207ENST00000435455 COPEO14579 308 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms