RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 C7orf57Q8NEG2 295 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 OR1N1Q8NGS0 311 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 SUN3Q8TAQ9 357 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 ELP5Q8TE02 316 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 UBLCP1Q8WVY7 318 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-207ENST00000430858 RGMAQ96B86 450 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 MAGEB10Q96LZ2 347 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-207ENST00000430858 MTERF1Q99551 399 aaKnown RBP9.2□□□□□ -0.94
HDAC6-207ENST00000430858 BARD1Q99728 777 aaKnown RBP9.2□□□□□ -0.94
HDAC6-207ENST00000430858 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.2□□□□□ -0.94
HDAC6-207ENST00000430858 OR51B5Q9H339 312 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 NOL11Q9H8H0 719 aaKnown RBP9.2□□□□□ -0.94
HDAC6-207ENST00000430858 DMRT3Q9NQL9 472 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 ASF1BQ9NVP2 202 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 PLA2G3Q9NZ20 509 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 KCMF1Q9P0J7 381 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 PCTPQ9UKL6 214 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 PPT2Q9UMR5 302 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 RNF11Q9Y3C5 154 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 HELZ2Q9BYK8 2649 aaKnown RBP9.19□□□□□ -0.94
HDAC6-207ENST00000430858 OR5H15A6NDH6 313 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 A8MT66 165 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 TCP11X1B4DZS4 312 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 FOXE1O00358 373 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-207ENST00000430858 SAP18O00422 153 aaKnown RBP9.19□□□□□ -0.94
HDAC6-207ENST00000430858 RTCAO00442 366 aaKnown RBP9.19□□□□□ -0.94
HDAC6-207ENST00000430858 OR7A17O14581 309 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 CTNSO60931 367 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 SH3BGRLO75368 114 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 GSTA1P08263 222 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 RPS17P08708 135 aaKnown RBP9.19□□□□□ -0.94
HDAC6-207ENST00000430858 SBK3P0C264 359 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 GNLYP22749 145 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 SSR2P43308 183 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 HNRNPFP52597 415 aaKnown RBP9.19□□□□□ -0.94
HDAC6-207ENST00000430858 RPS13P62277 151 aaKnown RBP9.19□□□□□ -0.94
HDAC6-207ENST00000430858 CUL3Q13618 768 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 ZRSR2Q15696 482 aaKnown RBP9.19□□□□□ -0.94
HDAC6-207ENST00000430858 INAQ16352 499 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 GGTA1PQ4G0N0 100 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 OR4C11Q6IEV9 310 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 MILR1Q7Z6M3 343 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 CRLF3Q8IUI8 442 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 ZCCHC7Q8N3Z6 543 aaKnown RBP9.19□□□□□ -0.94
HDAC6-207ENST00000430858 AMER2Q8N7J2 671 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 NFAM1Q8NET5 270 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-207ENST00000430858 B3GNT7Q8NFL0 401 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 OR52B6Q8NGF0 335 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 WDR20Q8TBZ3 569 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 C19orf60Q96EN9 201 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 NSUN5Q96P11 429 aaKnown RBP9.19□□□□□ -0.94
HDAC6-207ENST00000430858 CDK15Q96Q40 435 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 CSF3RQ99062 836 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 C1QTNF3Q9BXJ4 246 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 ZBTB26Q9HCK0 441 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 MS4A12Q9NXJ0 267 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 TMEM216Q9P0N5 145 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 TBK1Q9UHD2 729 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 DCDC2Q9UHG0 476 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 CLDN16Q9Y5I7 305 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 DOCK10Q96BY6 2186 aa9.19□□□□□ -0.94
HDAC6-207ENST00000430858 A8MUA0 341 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 GOLGA8RI6L899 631 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 PLPP1O14494 284 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 ZNF500O60304 480 aaPredicted RBP9.18□□□□□ -0.94
HDAC6-207ENST00000430858 PRAMEF2O60811 474 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 MYO1DO94832 1006 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 OTCP00480 354 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 SHBGP04278 402 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 PYGBP11216 843 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 CPN2P22792 545 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 UQCRFS1P47985 274 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 CLCN2P51788 898 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 NEK2P51955 445 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 HERVK_113P63132 956 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 STX4Q12846 297 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 IFT88Q13099 833 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 TRAF3Q13114 568 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 SLAMF1Q13291 335 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 SERTAD2Q14140 314 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 RASA2Q15283 850 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 FRG2Q64ET8 278 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 FCRLBQ6BAA4 426 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 TTC19Q6DKK2 380 aaPredicted RBP9.18□□□□□ -0.94
HDAC6-207ENST00000430858 FAM180AQ6UWF9 173 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 TDRPQ86YL5 185 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 SLC22A9Q8IVM8 553 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 BEST3Q8N1M1 668 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 RNF175Q8N4F7 328 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 FAM26EQ8N5C1 309 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 BCORP1Q8N888 145 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 APCDD1LQ8NCL9 501 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 TMEM52Q8NDY8 209 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 MYRIPQ8NFW9 859 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 OR4F6Q8NGB9 312 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 GRHL3Q8TE85 626 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 ZNF483Q8TF39 744 aaPredicted RBP9.18□□□□□ -0.94
HDAC6-207ENST00000430858 MZB1Q8WU39 189 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 FAR1Q8WVX9 515 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 FRG2BQ96QU4 278 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms