RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 OSTF1Q92882 214 aa14.83□□□□□ -0.03
PTPRF-206ENST00000429895 PDE7BQ9NP56 450 aa14.83□□□□□ -0.03
PTPRF-206ENST00000429895 CMAHPQ9Y471 501 aa14.83□□□□□ -0.03
PTPRF-206ENST00000429895 SEC14L5O43304 696 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 AOC1P19801 751 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 ZNF763Q0D2J5 394 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 GAS6Q14393 721 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 NUFIP1Q9UHK0 495 aaKnown RBP14.83□□□□□ -0.04
PTPRF-206ENST00000429895 COQ4Q9Y3A0 265 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 SPATA31D1Q6ZQQ2 1576 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 M0R129 80 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 SLC26A5P58743 744 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 CNPY1Q3B7I2 92 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 CRTC1Q6UUV9 634 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 ZNF709Q8N972 641 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 SLC37A3Q8NCC5 494 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 IGSF21Q96ID5 467 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 PKP2Q99959 881 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 hCG_1807616A0A1W2PRN6 198 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 CSTAP01040 98 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 HLA-DPB1P04440 258 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 WDR4P57081 412 aaKnown RBP14.83□□□□□ -0.04
PTPRF-206ENST00000429895 DTX3Q8N9I9 347 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 TSGA13Q96PP4 275 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 SLC7A8Q9UHI5 535 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 NFKBIEO00221 500 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 SDC3O75056 442 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 APOL3O95236 402 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 MT-ND5P03915 603 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 OTX2P32243 289 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 FASLGP48023 281 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 ACADVLP49748 655 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 PAFAH1B3Q15102 231 aaKnown RBP14.83□□□□□ -0.04
PTPRF-206ENST00000429895 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.83□□□□□ -0.04
PTPRF-206ENST00000429895 TRMT10AQ8TBZ6 339 aaKnown RBP14.83□□□□□ -0.04
PTPRF-206ENST00000429895 SUN5Q8TC36 379 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 BADQ92934 168 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 FETUBQ9UGM5 382 aa14.83□□□□□ -0.04
PTPRF-206ENST00000429895 VEGFDO43915 354 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 PIGRP01833 764 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 PFKMP08237 780 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 KCNE1P15382 129 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 E2F1Q01094 437 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 GALK2Q01415 458 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 TRAM2Q15035 370 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 FAM214AQ32MH5 1076 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 LRIT3Q3SXY7 679 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 CHRFAM7AQ494W8 412 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 GALNT12Q8IXK2 581 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 OR5J2Q8NH18 312 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 HSPA12BQ96MM6 686 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 WDR92Q96MX6 357 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 OSBPL7Q9BZF2 842 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 REEP4Q9H6H4 257 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 ACSL5Q9ULC5 683 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 A0A1B0GVC2 190 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 UQCRC2P22695 453 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 MAPK3P27361 379 aaPredicted RBP14.82□□□□□ -0.04
PTPRF-206ENST00000429895 NAA10P41227 235 aaPredicted RBP14.82□□□□□ -0.04
PTPRF-206ENST00000429895 PSMA6P60900 246 aaKnown RBP14.82□□□□□ -0.04
PTPRF-206ENST00000429895 RHDQ02161 417 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 LPAL2Q16609 132 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 LRRC37A5PQ49AS3 106 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 MSS51Q4VC12 460 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 TMEM107Q6UX40 140 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 VTCN1Q7Z7D3 282 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 C1orf21Q9H246 121 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 PCDHB16Q9NRJ7 776 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 DUX1O43812 170 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 CSF2RAP15509 400 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 GALNT2Q10471 571 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 SLAMF1Q13291 335 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 FAM189A2Q15884 450 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 ALG10BQ5I7T1 473 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 CD300LFQ8TDQ1 290 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 TMEM234Q8WY98 164 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 FBXL20Q96IG2 436 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 MS4A12Q9NXJ0 267 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 PRODH2Q9UF12 536 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 DEFB134Q4QY38 66 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 LRIF1Q5T3J3 769 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 RNF111Q6ZNA4 994 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 NUP43Q8NFH3 380 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 IL17FQ96PD4 163 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 RAD9AQ99638 391 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 TRAV6A0A075B6T7 132 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 PRSS51A0A1B0GVH4 220 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 SFTPBP07988 381 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 RBM39Q14498 530 aaKnown RBP14.82□□□□□ -0.04
PTPRF-206ENST00000429895 ZNF792Q3KQV3 632 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 REEP3Q6NUK4 255 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 PHTF2Q8N3S3 785 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 KIAA1191Q96A73 305 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 FNIP2Q9P278 1114 aa14.82□□□□□ -0.04
PTPRF-206ENST00000429895 IL3P08700 152 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 ZNF678Q5SXM1 525 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 ZER1Q7Z7L7 766 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 SORCS1Q8WY21 1168 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 SLC6A7Q99884 636 aa14.81□□□□□ -0.04
PTPRF-206ENST00000429895 G6PC3Q9BUM1 346 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 390.1 ms