RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 SDE2Q6IQ49 451 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 TMEM179BQ7Z7N9 219 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 GALNT13Q8IUC8 556 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 RIMKLAQ8IXN7 391 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 LMNTD1Q8N9Z9 388 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 OR9A1PQ8NGU1 263 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 TFGQ92734 400 aaPredicted RBP12.12□□□□□ -0.47
CPNE4-201ENST00000429747 FATE1Q969F0 183 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 CIDECQ96AQ7 238 aaPredicted RBP12.12□□□□□ -0.47
CPNE4-201ENST00000429747 IRF2BPLQ9H1B7 796 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 TAS2R16Q9NYV7 291 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 MGAT4BQ9UQ53 548 aa12.12□□□□□ -0.47
CPNE4-201ENST00000429747 DLGAP1O14490 977 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 CDK1P06493 297 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 C1GALT1C1LP0DN25 315 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 CELP19835 753 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 RPL4P36578 427 aaKnown RBP12.11□□□□□ -0.47
CPNE4-201ENST00000429747 CTSOP43234 321 aaPredicted RBP12.11□□□□□ -0.47
CPNE4-201ENST00000429747 RGS6P49758 472 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 PCDH1Q08174 1060 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 KCNC3Q14003 757 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 MICAQ29983 383 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 FAM46CQ5VWP2 391 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 ARMC6Q6NXE6 501 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 MSANTD1Q6ZTZ1 278 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 SPATC1Q76KD6 591 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 ZNF551Q7Z340 670 aaPredicted RBP12.11□□□□□ -0.47
CPNE4-201ENST00000429747 SLC30A8Q8IWU4 369 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 IQCF1Q8N6M8 205 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 GGHQ92820 318 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 GLYATL1Q969I3 302 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 TESCQ96BS2 214 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 C5AR2Q9P296 337 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 STOX2Q9P2F5 926 aaPredicted RBP12.11□□□□□ -0.47
CPNE4-201ENST00000429747 HSPB11Q9Y547 144 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 COL4A5P29400 1685 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 A0A1W2PQ45 241 aaPredicted RBP12.11□□□□□ -0.47
CPNE4-201ENST00000429747 A0A1W2PQY0 241 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 FAM86C2PA6NEL3 165 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 FAM170BA6NMN3 283 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 SLC16A5O15375 505 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 TPD52L2O43399 206 aaKnown RBP12.11□□□□□ -0.47
CPNE4-201ENST00000429747 C8orf89P0DMQ9 161 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 LAMP2P13473 410 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 ATP12AP54707 1039 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 CDH11P55287 796 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 CATSPEREQ5SY80 951 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 C17orf99Q6UX52 265 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 OTOP2Q7RTS6 562 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 LIMS2Q7Z4I7 341 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 BTLAQ7Z6A9 289 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 CHPFQ8IZ52 775 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 NLGN4XQ8N0W4 816 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 PARP16Q8N5Y8 322 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 Q8N9G6 341 aaPredicted RBP12.11□□□□□ -0.47
CPNE4-201ENST00000429747 RHNO1Q9BSD3 238 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 TP63Q9H3D4 680 aaPredicted RBP12.11□□□□□ -0.47
CPNE4-201ENST00000429747 MTG2Q9H4K7 406 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 TMEM98Q9Y2Y6 226 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 ENPP4Q9Y6X5 453 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 NUAK1O60285 661 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 MMP20O60882 483 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 EPHX1P07099 455 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 SRCP12931 536 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 HSD3B1P14060 373 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 RHCEP18577 417 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 CPN2P22792 545 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 HSD3B2P26439 372 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 PRR5P85299 388 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 NKG7Q16617 165 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 STEAP3Q658P3 488 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 TRIM46Q7Z4K8 759 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 LHFPL3Q86UP9 236 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 DTX3Q8N9I9 347 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 FAM83FQ8NEG4 500 aaPredicted RBP12.11□□□□□ -0.47
CPNE4-201ENST00000429747 OR52N2Q8NGI0 321 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 KLK6Q92876 244 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 NMNAT1Q9HAN9 279 aaPredicted RBP12.11□□□□□ -0.47
CPNE4-201ENST00000429747 IL36AQ9UHA7 158 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 ERVW-1Q9UQF0 538 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 A0A1W2PQ72 361 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 H7BY64 318 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 PCDHGA12O60330 932 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 OR12D1P0DN82 309 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 AOAHP28039 575 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 LIPAP38571 399 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 YBX1P67809 324 aaKnown RBP12.11□□□□□ -0.47
CPNE4-201ENST00000429747 FCHO2Q0JRZ9 810 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 SUZ12Q15022 739 aaKnown RBP12.11□□□□□ -0.47
CPNE4-201ENST00000429747 PTGES3Q15185 160 aaKnown RBP12.11□□□□□ -0.47
CPNE4-201ENST00000429747 RPS26P11Q5JNZ5 115 aaPredicted RBP12.11□□□□□ -0.47
CPNE4-201ENST00000429747 ZNF433Q8N7K0 673 aaPredicted RBP12.11□□□□□ -0.47
CPNE4-201ENST00000429747 OR8J1Q8NGP2 316 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 MRPL48Q96GC5 212 aaKnown RBP12.11□□□□□ -0.47
CPNE4-201ENST00000429747 ZNF486Q96H40 463 aaPredicted RBP12.11□□□□□ -0.47
CPNE4-201ENST00000429747 LRR1Q96L50 414 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 PRAP1Q96NZ9 151 aa12.11□□□□□ -0.47
CPNE4-201ENST00000429747 DNMT3AQ9Y6K1 912 aaPredicted RBP12.11□□□□□ -0.47
CPNE4-201ENST00000429747 ARHGEF33A8MVX0 844 aa12.1□□□□□ -0.47
CPNE4-201ENST00000429747 TMEM189-UBE2V1I3L0A0 370 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms