RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 RNF224P0DH78 156 aa16.93■□□□□ 0.3
SSR4P1-202ENST00000429427 HIST1H1TP22492 207 aaPredicted RBP16.93■□□□□ 0.3
SSR4P1-202ENST00000429427 PIK3CGP48736 1102 aa16.93■□□□□ 0.3
SSR4P1-202ENST00000429427 AP2B1P63010 937 aa16.93■□□□□ 0.3
SSR4P1-202ENST00000429427 TRAF3Q13114 568 aa16.93■□□□□ 0.3
SSR4P1-202ENST00000429427 DDX39BQ13838 428 aaKnown RBP16.93■□□□□ 0.3
SSR4P1-202ENST00000429427 UBAP2LQ14157 1087 aaKnown RBP16.93■□□□□ 0.3
SSR4P1-202ENST00000429427 TSNAXIP1Q2TAA8 658 aa16.93■□□□□ 0.3
SSR4P1-202ENST00000429427 TMEM35AQ53FP2 167 aa16.93■□□□□ 0.3
SSR4P1-202ENST00000429427 DEPDC1Q5TB30 811 aa16.93■□□□□ 0.3
SSR4P1-202ENST00000429427 ABHD17BQ5VST6 288 aa16.93■□□□□ 0.3
SSR4P1-202ENST00000429427 LIPJQ5W064 366 aa16.93■□□□□ 0.3
SSR4P1-202ENST00000429427 METTL2BQ6P1Q9 378 aaKnown RBP16.93■□□□□ 0.3
SSR4P1-202ENST00000429427 CLNKQ7Z7G1 428 aa16.93■□□□□ 0.3
SSR4P1-202ENST00000429427 MYLK4Q86YV6 388 aaPredicted RBP16.93■□□□□ 0.3
SSR4P1-202ENST00000429427 APCDD1LQ8NCL9 501 aa16.93■□□□□ 0.3
SSR4P1-202ENST00000429427 WDR20Q8TBZ3 569 aa16.93■□□□□ 0.3
SSR4P1-202ENST00000429427 GRHL3Q8TE85 626 aa16.93■□□□□ 0.3
SSR4P1-202ENST00000429427 SCYL1Q96KG9 808 aa16.93■□□□□ 0.3
SSR4P1-202ENST00000429427 MRPL57Q9BQC6 102 aaKnown RBP16.93■□□□□ 0.3
SSR4P1-202ENST00000429427 MRPL46Q9H2W6 279 aaKnown RBP16.93■□□□□ 0.3
SSR4P1-202ENST00000429427 NOL11Q9H8H0 719 aaKnown RBP16.93■□□□□ 0.3
SSR4P1-202ENST00000429427 ANGPTL3Q9Y5C1 460 aa16.93■□□□□ 0.3
SSR4P1-202ENST00000429427 TNPO3Q9Y5L0 923 aaKnown RBP16.93■□□□□ 0.3
SSR4P1-202ENST00000429427 MYOCOSA0A1B0GUC4 107 aa16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 OR5H15A6NDH6 313 aa16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 A8MT66 165 aa16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 PLPP1O14494 284 aa16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 UGDHO60701 494 aa16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 SHBGP04278 402 aa16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 RPS17P08708 135 aaKnown RBP16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 SERPINB1P30740 379 aa16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 PIK3CBP42338 1070 aa16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 GPR143P51810 404 aa16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 NEK2P51955 445 aa16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 HSD17B7P56937 341 aa16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 RPS13P62277 151 aaKnown RBP16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 TUBA3CQ13748 450 aa16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 CPSF6Q16630 551 aaKnown RBP eCLIP16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 EIF2S3LQ2VIR3 472 aaKnown RBP16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 TEX35Q5T0J7 233 aa16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 ZNF468Q5VIY5 522 aaPredicted RBP16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 TUBA3EQ6PEY2 450 aa16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 CMTM7Q96FZ5 175 aa16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 SIGLEC12Q96PQ1 595 aa16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 TBCDQ9BTW9 1192 aa16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 COPS7BQ9H9Q2 264 aaPredicted RBP16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 LYRM4Q9HD34 91 aa16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 PRTFDC1Q9NRG1 225 aa16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 ANKRD10Q9NXR5 420 aa16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 TMEM216Q9P0N5 145 aa16.92■□□□□ 0.3
SSR4P1-202ENST00000429427 DOPEY1Q5JWR5 2465 aa16.91■□□□□ 0.3
SSR4P1-202ENST00000429427 A0A088AWK7 358 aa16.91■□□□□ 0.3
SSR4P1-202ENST00000429427 TRAV17A0A0B4J275 112 aa16.91■□□□□ 0.3
SSR4P1-202ENST00000429427 SEMA7AO75326 666 aa16.91■□□□□ 0.3
SSR4P1-202ENST00000429427 MYO1DO94832 1006 aa16.91■□□□□ 0.3
SSR4P1-202ENST00000429427 UQCRHP07919 91 aa16.91■□□□□ 0.3
SSR4P1-202ENST00000429427 ZNF10P21506 573 aaPredicted RBP16.91■□□□□ 0.3
SSR4P1-202ENST00000429427 HPDP32754 393 aaPredicted RBP16.91■□□□□ 0.3
SSR4P1-202ENST00000429427 SRSF11Q05519 484 aaKnown RBP16.91■□□□□ 0.3
SSR4P1-202ENST00000429427 ZRSR2Q15696 482 aaKnown RBP16.91■□□□□ 0.3
SSR4P1-202ENST00000429427 ZNF324BQ6AW86 544 aaPredicted RBP16.91■□□□□ 0.3
SSR4P1-202ENST00000429427 RPUSD3Q6P087 351 aaKnown RBP16.91■□□□□ 0.3
SSR4P1-202ENST00000429427 ZNF595Q8IYB9 648 aa16.91■□□□□ 0.3
SSR4P1-202ENST00000429427 FAM26EQ8N5C1 309 aa16.91■□□□□ 0.3
SSR4P1-202ENST00000429427 EIF1ADQ8N9N8 165 aaKnown RBP16.91■□□□□ 0.3
SSR4P1-202ENST00000429427 MDS2Q8NDY4 140 aa16.91■□□□□ 0.3
SSR4P1-202ENST00000429427 ADAMTS18Q8TE60 1221 aa16.91■□□□□ 0.3
SSR4P1-202ENST00000429427 ZNF483Q8TF39 744 aaPredicted RBP16.91■□□□□ 0.3
SSR4P1-202ENST00000429427 SLX1AQ9BQ83 275 aa16.91■□□□□ 0.3
SSR4P1-202ENST00000429427 HES7Q9BYE0 225 aa16.91■□□□□ 0.3
SSR4P1-202ENST00000429427 ANKZF1Q9H8Y5 726 aa16.91■□□□□ 0.3
SSR4P1-202ENST00000429427 FETUBQ9UGM5 382 aa16.91■□□□□ 0.3
SSR4P1-202ENST00000429427 ZNF225Q9UK10 706 aa16.91■□□□□ 0.3
SSR4P1-202ENST00000429427 PPIEQ9UNP9 301 aaKnown RBP16.91■□□□□ 0.3
SSR4P1-202ENST00000429427 GOLGA8RI6L899 631 aa16.9■□□□□ 0.3
SSR4P1-202ENST00000429427 EEDO75530 441 aaKnown RBP16.9■□□□□ 0.3
SSR4P1-202ENST00000429427 PRKRAO75569 313 aaKnown RBP16.9■□□□□ 0.3
SSR4P1-202ENST00000429427 WISP2O76076 250 aa16.9■□□□□ 0.3
SSR4P1-202ENST00000429427 TNFRSF8P28908 595 aa16.9■□□□□ 0.3
SSR4P1-202ENST00000429427 CD96P40200 585 aa16.9■□□□□ 0.3
SSR4P1-202ENST00000429427 SSR2P43308 183 aa16.9■□□□□ 0.3
SSR4P1-202ENST00000429427 TGM3Q08188 693 aa16.9■□□□□ 0.3
SSR4P1-202ENST00000429427 SLC13A2Q13183 592 aa16.9■□□□□ 0.3
SSR4P1-202ENST00000429427 OR4C11Q6IEV9 310 aa16.9■□□□□ 0.3
SSR4P1-202ENST00000429427 CHSY3Q70JA7 882 aa16.9■□□□□ 0.3
SSR4P1-202ENST00000429427 ZNF227Q86WZ6 799 aa16.9■□□□□ 0.3
SSR4P1-202ENST00000429427 ARMC10Q8N2F6 343 aa16.9■□□□□ 0.3
SSR4P1-202ENST00000429427 FAR1Q8WVX9 515 aa16.9■□□□□ 0.3
SSR4P1-202ENST00000429427 MTBPQ96DY7 904 aa16.9■□□□□ 0.3
SSR4P1-202ENST00000429427 ZNF354BQ96LW1 612 aa16.9■□□□□ 0.3
SSR4P1-202ENST00000429427 NTMT1Q9BV86 223 aa16.9■□□□□ 0.3
SSR4P1-202ENST00000429427 C1QTNF3Q9BXJ4 246 aa16.9■□□□□ 0.3
SSR4P1-202ENST00000429427 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.9■□□□□ 0.3
SSR4P1-202ENST00000429427 PNO1Q9NRX1 252 aaKnown RBP16.9■□□□□ 0.3
SSR4P1-202ENST00000429427 PSMC3IPQ9P2W1 217 aaPredicted RBP16.9■□□□□ 0.3
SSR4P1-202ENST00000429427 ADGRE2Q9UHX3 823 aa16.9■□□□□ 0.3
SSR4P1-202ENST00000429427 TEKT2Q9UIF3 430 aa16.9■□□□□ 0.3
SSR4P1-202ENST00000429427 PCDHGA11Q9Y5H2 935 aa16.9■□□□□ 0.3
SSR4P1-202ENST00000429427 SPTBN1Q01082 2364 aaKnown RBP16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms