RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 DHRS4L1P0CG22 281 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 C8orf89P0DMQ9 161 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 MAOAP21397 527 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 IL10P22301 178 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 MMP11P24347 488 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 GRK2P25098 689 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 SERPINB5P36952 375 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 CCL11P51671 97 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 EEF1A2Q05639 463 aaKnown RBP13.73□□□□□ -0.21
SGCE-204ENST00000428696 CSTF3Q12996 717 aaKnown RBP13.73□□□□□ -0.21
SGCE-204ENST00000428696 PPP1R32Q7Z5V6 425 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 CLNKQ7Z7G1 428 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 GPR180Q86V85 440 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 NUDT13Q86X67 352 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 CLYBLQ8N0X4 340 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 C1orf52Q8N6N3 182 aaKnown RBP13.73□□□□□ -0.21
SGCE-204ENST00000428696 GBP7Q8N8V2 638 aaPredicted RBP13.73□□□□□ -0.21
SGCE-204ENST00000428696 PPP1R36Q96LQ0 422 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 CATSPER2Q96P56 530 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 ACPTQ9BZG2 426 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 CLK4Q9HAZ1 481 aaKnown RBP13.73□□□□□ -0.21
SGCE-204ENST00000428696 P4HTMQ9NXG6 502 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 PSD3Q9NYI0 1048 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 ZDHHC2Q9UIJ5 367 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 LHX6Q9UPM6 363 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 MRPS33Q9Y291 106 aaKnown RBP13.73□□□□□ -0.21
SGCE-204ENST00000428696 USP24Q9UPU5 2620 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 IGHV3-20A0A0C4DH32 117 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 GNG14A0A1W2PPG7 69 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 GLOD5A6NK44 160 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 A8MUA0 341 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 TMEM114B3SHH9 223 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 MASP2O00187 686 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 ALOX12BO75342 701 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 FAM58BPP0C7Q3 252 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 ACPPP15309 386 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 TLX1P31314 330 aaPredicted RBP13.72□□□□□ -0.21
SGCE-204ENST00000428696 BSGP35613 385 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 MAPK12P53778 367 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 RAB38P57729 211 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 ACSM2AQ08AH3 577 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 TBR1Q16650 682 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 CES4AQ5XG92 561 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 ACSM2BQ68CK6 577 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 BORAQ6PGQ7 559 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 COMMD6Q7Z4G1 85 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 MRGPREQ86SM8 312 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 TRIM42Q8IWZ5 723 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 CDC26Q8NHZ8 85 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 APOBEC4Q8WW27 367 aaKnown RBP13.72□□□□□ -0.21
SGCE-204ENST00000428696 VPS50Q96JG6 964 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 OR1F2PQ96R84 312 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 ILKAPQ9H0C8 392 aaPredicted RBP13.72□□□□□ -0.21
SGCE-204ENST00000428696 MANSC1Q9H8J5 431 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 LYRM4Q9HD34 91 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 PRTFDC1Q9NRG1 225 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 FBXL4Q9UKA2 621 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 DAPP1Q9UN19 280 aa13.72□□□□□ -0.21
SGCE-204ENST00000428696 PKD1L2Q7Z442 2459 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 SLC28A1O00337 649 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 RGS14O43566 566 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 SEC22BO75396 215 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 SKAP2O75563 359 aaPredicted RBP13.71□□□□□ -0.22
SGCE-204ENST00000428696 SEMA3DO95025 777 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 RECKO95980 971 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 HSD3B1P14060 373 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 HSD3B2P26439 372 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 ARRB2P32121 409 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 SLC18A1P54219 525 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 PPP2R2AP63151 447 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 ID2Q02363 134 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 BST1Q10588 318 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 STX4Q12846 297 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 RAPSNQ13702 412 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 NR6A1Q15406 480 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 TUBB8Q3ZCM7 444 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 ATG16L1Q676U5 607 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 C18orf63Q68DL7 685 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 KIRREL2Q6UWL6 708 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 LANCL3Q6ZV70 420 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 OR4N5Q8IXE1 308 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 PARP9Q8IXQ6 854 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 METTL4Q8N3J2 472 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 CLEC1AQ8NC01 280 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 TSLPQ969D9 159 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 APIPQ96GX9 242 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 FER1L6-AS2Q96M78 137 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 IP6K3Q96PC2 410 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 CSF3RQ99062 836 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 EBPLQ9BY08 206 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 ING2Q9H160 280 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 DDX31Q9H8H2 851 aaKnown RBP13.71□□□□□ -0.22
SGCE-204ENST00000428696 WDR41Q9HAD4 459 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 ZNF160Q9HCG1 818 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 INTS9Q9NV88 658 aaKnown RBP13.71□□□□□ -0.22
SGCE-204ENST00000428696 KCMF1Q9P0J7 381 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 PHF11Q9UIL8 331 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 ATG4BQ9Y4P1 393 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 HS3ST3B1Q9Y662 390 aa13.71□□□□□ -0.22
SGCE-204ENST00000428696 CACNA1BQ00975 2339 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms