RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 AURKCQ9UQB9 309 aa14.43□□□□□ -0.1
ACTB-204ENST00000425660 CSNK1G3Q9Y6M4 447 aa14.43□□□□□ -0.1
ACTB-204ENST00000425660 BDP1A6H8Y1 2624 aa14.43□□□□□ -0.1
ACTB-204ENST00000425660 MDC1Q14676 2089 aaKnown RBP14.42□□□□□ -0.1
ACTB-204ENST00000425660 MYO15AQ9UKN7 3530 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 TTC28Q96AY4 2481 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 URADA6NGE7 173 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 GSTA4O15217 222 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 ZSCAN9O15535 394 aaPredicted RBP14.42□□□□□ -0.1
ACTB-204ENST00000425660 P2RX6O15547 441 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 BMP2P12643 396 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 PVRP15151 417 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 ACADSP16219 412 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 TYRP1P17643 537 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 IL1RNP18510 177 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 CERS1P27544 350 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 RAB8AP61006 207 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 VEZF1Q14119 521 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 TEAD4Q15561 434 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 VMACQ2NL98 169 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 PMS2CLQ68D20 193 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 FRMPD2BQ6IN97 320 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 ARMC6Q6NXE6 501 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 IZUMO2Q6UXV1 221 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 PTOV1Q86YD1 416 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 ZZZ3Q8IYH5 903 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 CATSPER1Q8NEC5 780 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 FAM110BQ8TC76 370 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 OR5P2Q8WZ92 322 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 ROGDIQ9GZN7 287 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 AGPAT4Q9NRZ5 378 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 DCAF13Q9NV06 445 aaKnown RBP14.42□□□□□ -0.1
ACTB-204ENST00000425660 OLAHQ9NV23 265 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 UCKL1Q9NWZ5 548 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 ATG4BQ9Y4P1 393 aa14.42□□□□□ -0.1
ACTB-204ENST00000425660 LOC105369274A0A096LPK9 316 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 LOC102723532A0A0G2JNH3 316 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 A0A1B0GTW7 788 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 A0A1W2PR48 441 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 PDPK1O15530 556 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 CREG1O75629 220 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 TIPRLO75663 272 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 FCGR1AP12314 374 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 CTSKP43235 329 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 ALDH9A1P49189 494 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 VAC14Q08AM6 782 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 FADDQ13158 208 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 SUZ12Q15022 739 aaKnown RBP14.41□□□□□ -0.1
ACTB-204ENST00000425660 LRRC36Q1X8D7 754 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 DEFB133Q30KQ1 61 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 C14orf28Q4W4Y0 310 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 LYSMD4Q5XG99 296 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 HMBOX1Q6NT76 420 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 PDSS2Q86YH6 399 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 MAML2Q8IZL2 1156 aaPredicted RBP14.41□□□□□ -0.1
ACTB-204ENST00000425660 OR4N4Q8N0Y3 316 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 OR52N2Q8NGI0 321 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 RERGQ96A58 199 aaPredicted RBP14.41□□□□□ -0.1
ACTB-204ENST00000425660 ZBED6CLQ96FA7 236 aaPredicted RBP14.41□□□□□ -0.1
ACTB-204ENST00000425660 SLC35A5Q9BS91 424 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 LYARQ9NX58 379 aaKnown RBP14.41□□□□□ -0.1
ACTB-204ENST00000425660 CNOT11Q9UKZ1 510 aaKnown RBP14.41□□□□□ -0.1
ACTB-204ENST00000425660 TDRD6O60522 2096 aaKnown RBP14.41□□□□□ -0.1
ACTB-204ENST00000425660 A0A1B0GVT2 93 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 H0YGG7 62 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 PROM1O43490 865 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 PRAMEF10O60809 474 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 SDC3O75056 442 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 ZNF888P0CJ79 500 aaPredicted RBP14.41□□□□□ -0.1
ACTB-204ENST00000425660 HOXB6P17509 224 aaKnown RBP14.41□□□□□ -0.1
ACTB-204ENST00000425660 ATP6V1C1P21283 382 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 RXRGP48443 463 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 ARF3P61204 181 aaPredicted RBP14.41□□□□□ -0.1
ACTB-204ENST00000425660 TAF11Q15544 211 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 ZCCHC8Q6NZY4 707 aaKnown RBP14.41□□□□□ -0.1
ACTB-204ENST00000425660 ZNF655Q8N720 491 aaPredicted RBP14.41□□□□□ -0.1
ACTB-204ENST00000425660 ANKFN1Q8N957 763 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 PNPT1Q8TCS8 783 aaKnown RBP14.41□□□□□ -0.1
ACTB-204ENST00000425660 NETO1Q8TDF5 533 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 GAB3Q8WWW8 586 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 NAF1Q96HR8 494 aaKnown RBP14.41□□□□□ -0.1
ACTB-204ENST00000425660 TRAPPC9Q96Q05 1148 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 SLC38A3Q99624 504 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 RAB33BQ9H082 229 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 KLHL25Q9H0H3 589 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 EPS8L2Q9H6S3 715 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 C5AR2Q9P296 337 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 CES1P1Q9UKY3 287 aa14.41□□□□□ -0.1
ACTB-204ENST00000425660 LAMTOR5O43504 91 aa14.4□□□□□ -0.1
ACTB-204ENST00000425660 AIFM1O95831 613 aa14.4□□□□□ -0.1
ACTB-204ENST00000425660 PROS1P07225 676 aa14.4□□□□□ -0.1
ACTB-204ENST00000425660 RAP2AP10114 183 aa14.4□□□□□ -0.1
ACTB-204ENST00000425660 ST6GAL1P15907 406 aa14.4□□□□□ -0.1
ACTB-204ENST00000425660 UQCRC2P22695 453 aa14.4□□□□□ -0.1
ACTB-204ENST00000425660 FASP25445 335 aa14.4□□□□□ -0.1
ACTB-204ENST00000425660 EPHA4P54764 986 aa14.4□□□□□ -0.1
ACTB-204ENST00000425660 MANFP55145 182 aaKnown RBP14.4□□□□□ -0.1
ACTB-204ENST00000425660 SNRPNP63162 240 aaKnown RBP14.4□□□□□ -0.1
ACTB-204ENST00000425660 BTN3A2P78410 334 aa14.4□□□□□ -0.1
ACTB-204ENST00000425660 CEBPEQ15744 281 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms