RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 REXO4Q9GZR2 422 aaKnown RBP11.93□□□□□ -0.5
SGCE-203ENST00000425444 VPS11Q9H270 941 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 ACSS3Q9H6R3 686 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 NT5DC2Q9H857 520 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 CLK4Q9HAZ1 481 aaKnown RBP11.93□□□□□ -0.5
SGCE-203ENST00000425444 ABI3Q9P2A4 366 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 SH3BGRL2Q9UJC5 107 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 ANGPTL3Q9Y5C1 460 aa11.93□□□□□ -0.5
SGCE-203ENST00000425444 A0A096LPK6 155 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 LRIT2A6NDA9 550 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 K7EPI3 171 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 B3GALT2O43825 422 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 WDPCPO95876 746 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 SMIM10L1P0DMW3 83 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 PCNAP12004 261 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 KCNC1P48547 511 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 TNFSF10P50591 281 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 PLA2G16P53816 162 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 TAS2R50P59544 299 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 TGM3Q08188 693 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 CHIT1Q13231 466 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 UBAP2Q5T6F2 1119 aaKnown RBP11.92□□□□□ -0.5
SGCE-203ENST00000425444 FCRLBQ6BAA4 426 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 GFRALQ6UXV0 394 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 RELL1Q8IUW5 271 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 CENPLQ8N0S6 344 aaPredicted RBP11.92□□□□□ -0.5
SGCE-203ENST00000425444 SLC5A8Q8N695 610 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 CEP112Q8N8E3 955 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 M1APQ8TC57 530 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 HAS2Q92819 552 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 MS4A6EQ96DS6 147 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 SMIM10Q96HG1 83 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 ZNF354BQ96LW1 612 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 AICDAQ9GZX7 198 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 MMP25Q9NPA2 562 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 PRDM9Q9NQV7 894 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 ASB1Q9Y576 335 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 PCDHGB6Q9Y5F9 930 aa11.92□□□□□ -0.5
SGCE-203ENST00000425444 OR5H15A6NDH6 313 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 TMEM200CA6NKL6 621 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 FAM227AF5H4B4 570 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 PRAMEF4O60810 478 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 KLHL2O95198 593 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 MYBL2P10244 700 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 CD22P20273 847 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 MAOAP21397 527 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 MSH2P43246 934 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 KIR3DL1P43629 444 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 BTG2P78543 158 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 ACAP2Q15057 778 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 TBCCQ15814 346 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 MEP1AQ16819 746 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 PFKFB4Q16877 469 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 PRAMEF9Q5VWM5 478 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 ADNP2Q6IQ32 1131 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 VN1R5Q7Z5H4 357 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 MYLK4Q86YV6 388 aaPredicted RBP11.91□□□□□ -0.5
SGCE-203ENST00000425444 TEX9Q8N6V9 391 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 FAM47BQ8NA70 645 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 OR2L5Q8NG80 312 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 RHEBL1Q8TAI7 183 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 UHMK1Q8TAS1 419 aaKnown RBP11.91□□□□□ -0.5
SGCE-203ENST00000425444 ADAMTS18Q8TE60 1221 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 UBTD2Q8WUN7 234 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 SLC44A1Q8WWI5 657 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 UBE2E3Q969T4 207 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 MTFMTQ96DP5 389 aaKnown RBP11.91□□□□□ -0.5
SGCE-203ENST00000425444 WDR34Q96EX3 536 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 PAFAH2Q99487 392 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 NPLQ9BXD5 320 aaPredicted RBP11.91□□□□□ -0.5
SGCE-203ENST00000425444 RNF32Q9H0A6 362 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 STMN3Q9NZ72 180 aa11.91□□□□□ -0.5
SGCE-203ENST00000425444 CPSF2Q9P2I0 782 aaKnown RBP11.91□□□□□ -0.5
SGCE-203ENST00000425444 MRPS33Q9Y291 106 aaKnown RBP11.91□□□□□ -0.5
SGCE-203ENST00000425444 CCDC189A1A4V9 331 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 HMX2A2RU54 273 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 SAGE2PA6NJ88 616 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 A8MUA0 341 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 POC1B-GALNT4F8VUJ3 575 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 ALDOAP04075 364 aaKnown RBP11.9□□□□□ -0.5
SGCE-203ENST00000425444 EPB42P16452 691 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 EPORP19235 508 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 CERS1P27544 350 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 ECHS1P30084 290 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 SERPINB9P50453 376 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 MTTPP55157 894 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 RAB38P57729 211 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 SLC26A5P58743 744 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 SLC13A2Q13183 592 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 DDX39BQ13838 428 aaKnown RBP11.9□□□□□ -0.5
SGCE-203ENST00000425444 RCN2Q14257 317 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 SETDB1Q15047 1291 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 INAQ16352 499 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 RPUSD3Q6P087 351 aaKnown RBP11.9□□□□□ -0.5
SGCE-203ENST00000425444 MED27Q6P2C8 311 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 CRLF3Q8IUI8 442 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 BEST3Q8N1M1 668 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 F2RL3Q96RI0 385 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 SERINC2Q96SA4 455 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 GSX1Q9H4S2 264 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms