RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 SLC44A1Q8WWI5 657 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 SMG7Q92540 1137 aaKnown RBP3.48□□□□□ -1.85
SF3B1-205ENST00000424674 HAS2Q92819 552 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 CELF1Q92879 486 aaKnown RBP3.48□□□□□ -1.85
SF3B1-205ENST00000424674 GLG1Q92896 1179 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 ZNF707Q96C28 371 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-205ENST00000424674 ORAI1Q96D31 301 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 SLC47A1Q96FL8 570 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 PBKQ96KB5 322 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 GPR78Q96P69 363 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 ACCSQ96QU6 501 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 TGS1Q96RS0 853 aaKnown RBP3.48□□□□□ -1.85
SF3B1-205ENST00000424674 ANKRD60Q9BZ19 345 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 API5Q9BZZ5 524 aaKnown RBP3.48□□□□□ -1.85
SF3B1-205ENST00000424674 WWP1Q9H0M0 922 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 ZDHHC6Q9H6R6 413 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 TBC1D17Q9HA65 648 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 MYNNQ9NPC7 610 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 ACOXLQ9NUZ1 547 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 ASB6Q9NWX5 421 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 SLC39A1Q9NY26 324 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 NKIRAS1Q9NYS0 192 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 OR14J1Q9UGF5 321 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 BCAP29Q9UHQ4 241 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 ERRFI1Q9UJM3 462 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-205ENST00000424674 RNF150Q9ULK6 438 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 ST3GAL5Q9UNP4 418 aa3.48□□□□□ -1.85
SF3B1-205ENST00000424674 LOC105371242A0A075B767 164 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 A0A1B0GUH1 482 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 A1L4Q6 167 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 LRRC3CA6NJW4 275 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 VCYO14598 125 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 CHEK1O14757 476 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 YY2O15391 372 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 MPPED1O15442 326 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 PRAF2O60831 178 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 ZNF217O75362 1048 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 STX11O75558 287 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 UPK3AO75631 287 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 SYNGR4O95473 234 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 CPNE6O95741 557 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 TOP3BO95985 862 aaKnown RBP3.47□□□□□ -1.85
SF3B1-205ENST00000424674 CRYGBP07316 175 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 PPP3CBP16298 524 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 CCNOP22674 350 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 MAT2AP31153 395 aaKnown RBP3.47□□□□□ -1.85
SF3B1-205ENST00000424674 OTX1P32242 354 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-205ENST00000424674 CD80P33681 288 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 OR1D2P34982 312 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 CRATP43155 626 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 TNFRSF4P43489 277 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 SLC6A8P48029 635 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 CCL11P51671 97 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 CCR4P51679 360 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 MAPK12P53778 367 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 STX17P56962 302 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 SEC61GP60059 68 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 RPS7P62081 194 aaKnown RBP3.47□□□□□ -1.85
SF3B1-205ENST00000424674 FUT7Q11130 342 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 GPS2Q13227 327 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 NME3Q13232 169 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 DMP1Q13316 513 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-205ENST00000424674 ITGADQ13349 1161 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 RFTN1Q14699 578 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-205ENST00000424674 HERC3Q15034 1050 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 TRIP10Q15642 601 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 SNCBQ16143 134 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 MEP1AQ16819 746 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 CTU2Q2VPK5 515 aaKnown RBP3.47□□□□□ -1.85
SF3B1-205ENST00000424674 DCAF4L1Q3SXM0 396 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 PLK5Q496M5 336 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 ZNF772Q68DY9 489 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-205ENST00000424674 TMEM53Q6P2H8 277 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 SLC39A4Q6P5W5 647 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 VWA1Q6PCB0 445 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 BTNL8Q6UX41 500 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 CENPUQ71F23 418 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 PEG10Q86TG7 708 aaKnown RBP3.47□□□□□ -1.85
SF3B1-205ENST00000424674 DTX2Q86UW9 622 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 LRRC6Q86X45 466 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 VRK2Q86Y07 508 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 SLC35F3Q8IY50 421 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 GATSQ8NAP1 163 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 ENGASEQ8NFI3 743 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 GJC3Q8NFK1 279 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 OR1J2Q8NGS2 313 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 TBC1D16Q8TBP0 767 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 ZNF398Q8TD17 642 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 SPRYD4Q8WW59 207 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-205ENST00000424674 P2RX5Q93086 422 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 OTULINQ96BN8 352 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 FAM20AQ96MK3 541 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 ZNF317Q96PQ6 595 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-205ENST00000424674 ALS2CR12Q96Q35 445 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 OR6C1Q96RD1 312 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 KRT12Q99456 494 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 OMDQ99983 421 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 TMEM175Q9BSA9 504 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 UBAC1Q9BSL1 405 aa3.47□□□□□ -1.85
SF3B1-205ENST00000424674 WRAP53Q9BUR4 548 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms