RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 PRTFDC1Q9NRG1 225 aa16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 PCTPQ9UKL6 214 aa16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 RNF11Q9Y3C5 154 aa16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 ANGPTL3Q9Y5C1 460 aa16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 POLEQ07864 2286 aa16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 UTP20O75691 2785 aaKnown RBP16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 A0A088AWK7 358 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 TRAV17A0A0B4J275 112 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 H0YIV9 168 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 STX16-NPEPL1H3BU86 382 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 STX16O14662 325 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 SEMA7AO75326 666 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 ETHE1O95571 254 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 RNF224P0DH78 156 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 ZNF10P21506 573 aaPredicted RBP16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 SERPINB1P30740 379 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 HPDP32754 393 aaPredicted RBP16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 TUBA3CQ13748 450 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 DDX39BQ13838 428 aaKnown RBP16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 TMEM35AQ53FP2 167 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 FAM219BQ5XKK7 198 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 ZNF324BQ6AW86 544 aaPredicted RBP16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 METTL2BQ6P1Q9 378 aaKnown RBP16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 TUBA3EQ6PEY2 450 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 RPS27LQ71UM5 84 aaKnown RBP16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 CLNKQ7Z7G1 428 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 ZNF595Q8IYB9 648 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 APCDD1LQ8NCL9 501 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 WDR20Q8TBZ3 569 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 ADAMTS18Q8TE60 1221 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 MZB1Q8WU39 189 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 FAR1Q8WVX9 515 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 CMTM7Q96FZ5 175 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 SCYL1Q96KG9 808 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 SIGLEC12Q96PQ1 595 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 CDK15Q96Q40 435 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 MTERF1Q99551 399 aaKnown RBP16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 ZNF717Q9BY31 904 aaPredicted RBP16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 NOL11Q9H8H0 719 aaKnown RBP16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 ACTR8Q9H981 624 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 COPS7BQ9H9Q2 264 aaPredicted RBP16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 TEKT2Q9UIF3 430 aa16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 ZNF223Q9UK11 482 aaPredicted RBP16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 TNPO3Q9Y5L0 923 aaKnown RBP16.68■□□□□ 0.26
SBDSP1-202ENST00000423945 A0A1B0GTL3 188 aa16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 MYOCOSA0A1B0GUC4 107 aa16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 PLPP1O14494 284 aa16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 UGDHO60701 494 aa16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 HIST1H1TP22492 207 aaPredicted RBP16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 PIK3CBP42338 1070 aa16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 PIK3CGP48736 1102 aa16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 GPR143P51810 404 aa16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 RPS13P62277 151 aaKnown RBP16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 TGM3Q08188 693 aa16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 TRAF3Q13114 568 aa16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 CPSF6Q16630 551 aaKnown RBP eCLIP16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 MEP1AQ16819 746 aa16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 ZNF468Q5VIY5 522 aaPredicted RBP16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 CHSY3Q70JA7 882 aa16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 MYLK4Q86YV6 388 aaPredicted RBP16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 MDS2Q8NDY4 140 aa16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 SRFBP1Q8NEF9 429 aaKnown RBP16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 SLX1AQ9BQ83 275 aa16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 MRPL57Q9BQC6 102 aaKnown RBP16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 ROGDIQ9GZN7 287 aa16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 MRPL46Q9H2W6 279 aaKnown RBP16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 CDCP1Q9H5V8 836 aa16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 LYRM4Q9HD34 91 aa16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 PNO1Q9NRX1 252 aaKnown RBP16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 TMEM216Q9P0N5 145 aa16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 ADGRE2Q9UHX3 823 aa16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 PPIEQ9UNP9 301 aaKnown RBP16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 PCDHGA11Q9Y5H2 935 aa16.67■□□□□ 0.26
SBDSP1-202ENST00000423945 ANKUB1A6NFN9 424 aa16.66■□□□□ 0.26
SBDSP1-202ENST00000423945 A8MT66 165 aa16.66■□□□□ 0.26
SBDSP1-202ENST00000423945 PPP6CO00743 305 aa16.66■□□□□ 0.26
SBDSP1-202ENST00000423945 RPS17P08708 135 aaKnown RBP16.66■□□□□ 0.26
SBDSP1-202ENST00000423945 CD96P40200 585 aa16.66■□□□□ 0.26
SBDSP1-202ENST00000423945 NEK2P51955 445 aa16.66■□□□□ 0.26
SBDSP1-202ENST00000423945 SRSF11Q05519 484 aaKnown RBP16.66■□□□□ 0.26
SBDSP1-202ENST00000423945 SPTAN1Q13813 2472 aaKnown RBP16.66■□□□□ 0.26
SBDSP1-202ENST00000423945 ZRSR2Q15696 482 aaKnown RBP16.66■□□□□ 0.26
SBDSP1-202ENST00000423945 OR4C11Q6IEV9 310 aa16.66■□□□□ 0.26
SBDSP1-202ENST00000423945 ARMC10Q8N2F6 343 aa16.66■□□□□ 0.26
SBDSP1-202ENST00000423945 ARMC2Q8NEN0 867 aa16.66■□□□□ 0.26
SBDSP1-202ENST00000423945 B3GNT7Q8NFL0 401 aa16.66■□□□□ 0.26
SBDSP1-202ENST00000423945 NTMT1Q9BV86 223 aa16.66■□□□□ 0.26
SBDSP1-202ENST00000423945 HES7Q9BYE0 225 aa16.66■□□□□ 0.26
SBDSP1-202ENST00000423945 AGPAT4Q9NRZ5 378 aa16.66■□□□□ 0.26
SBDSP1-202ENST00000423945 ANKRD10Q9NXR5 420 aa16.66■□□□□ 0.26
SBDSP1-202ENST00000423945 TMCO1Q9UM00 188 aa16.66■□□□□ 0.26
SBDSP1-202ENST00000423945 GABRR3A8MPY1 467 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 CYSRT1A8MQ03 144 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 CLDN4O14493 209 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 PRAMEF2O60811 474 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 CTNSO60931 367 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 LDB3O75112 727 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 SMIM24O75264 130 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 MYO1DO94832 1006 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms