RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 TBX19O60806 448 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 CTSVO60911 334 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 FKBP6O75344 327 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 ATP6V1G2O95670 118 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 AIFM1O95831 613 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 F12P00748 615 aaPredicted RBP5.66□□□□□ -1.5
HMGB3-202ENST00000419110 GBAP04062 536 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 EIF2S1P05198 315 aaKnown RBP5.66□□□□□ -1.5
HMGB3-202ENST00000419110 FAM58BPP0C7Q3 252 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 ZNF883P0CG24 379 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 HSD17B1P14061 328 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 DRD2P14416 443 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 PNLIPP16233 465 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 ALOX12P18054 663 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 SLC6A2P23975 617 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 ATP5A1P25705 553 aaKnown RBP5.66□□□□□ -1.5
HMGB3-202ENST00000419110 ALDH4A1P30038 563 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 TLX1P31314 330 aaPredicted RBP5.66□□□□□ -1.5
HMGB3-202ENST00000419110 CSF2RBP32927 897 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 GRK6P43250 576 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 GSK3BP49841 420 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 VSX2P58304 361 aaPredicted RBP5.66□□□□□ -1.5
HMGB3-202ENST00000419110 MTPNP58546 118 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 RAB8AP61006 207 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 ACTR3P61158 418 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 ARF3P61204 181 aaPredicted RBP5.66□□□□□ -1.5
HMGB3-202ENST00000419110 BNIP3Q12983 259 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 RIPK1Q13546 671 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 SPIDRQ14159 915 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 TLR1Q15399 786 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 SHBQ15464 509 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 LPAL2Q16609 132 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 CLPPQ16740 277 aaPredicted RBP5.66□□□□□ -1.5
HMGB3-202ENST00000419110 CYP51A1Q16850 503 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 MUM1Q2TAK8 710 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 AMZ1Q400G9 498 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 AASDHQ4L235 1098 aaPredicted RBP5.66□□□□□ -1.5
HMGB3-202ENST00000419110 MTX3Q5HYI7 312 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 TCTE1Q5JU00 501 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 PAGE3Q5JUK9 113 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 MANEAQ5SRI9 462 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 NDUFAF5Q5TEU4 345 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 FBXW10Q5XX13 1052 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 ANKRD26P1Q6NSI1 321 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 C8orf82Q6P1X6 216 aaPredicted RBP5.66□□□□□ -1.5
HMGB3-202ENST00000419110 ANGPTL8Q6UXH0 198 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 ZNF793Q6ZN11 406 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 KANSL1Q7Z3B3 1105 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 KMT5CQ86Y97 462 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 GATAD2AQ86YP4 633 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 HPS6Q86YV9 775 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 TICAM1Q8IUC6 712 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 SAMD14Q8IZD0 417 aaPredicted RBP5.66□□□□□ -1.5
HMGB3-202ENST00000419110 SLC25A45Q8N413 288 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 ACOT4Q8N9L9 421 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 FAM181AQ8N9Y4 354 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 BHLHE22Q8NFJ8 381 aaPredicted RBP5.66□□□□□ -1.5
HMGB3-202ENST00000419110 OR8K5Q8NH50 307 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 NCSTNQ92542 709 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 GTF2H4Q92759 462 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 TMEM125Q96AQ2 219 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 EXOSC8Q96B26 276 aaKnown RBP5.66□□□□□ -1.5
HMGB3-202ENST00000419110 FAM120BQ96EK7 910 aaKnown RBP5.66□□□□□ -1.5
HMGB3-202ENST00000419110 ZBED6CLQ96FA7 236 aaPredicted RBP5.66□□□□□ -1.5
HMGB3-202ENST00000419110 EGLN2Q96KS0 407 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 TMEM74Q96NL1 305 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 ANKRD27Q96NW4 1050 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 TRAPPC9Q96Q05 1148 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 TEFMQ96QE5 360 aaKnown RBP5.66□□□□□ -1.5
HMGB3-202ENST00000419110 OR2A5Q96R48 311 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 CDRT15Q96T59 188 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 MAP3K3Q99759 626 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 GPATCH1Q9BRR8 931 aaKnown RBP5.66□□□□□ -1.5
HMGB3-202ENST00000419110 SPATA9Q9BWV2 254 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 CHRNA10Q9GZZ6 450 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 DENND2DQ9H6A0 471 aaPredicted RBP5.66□□□□□ -1.5
HMGB3-202ENST00000419110 DDX31Q9H8H2 851 aaKnown RBP5.66□□□□□ -1.5
HMGB3-202ENST00000419110 IL21RQ9HBE5 538 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 ANKHQ9HCJ1 492 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 TMEM74BQ9NUR3 256 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 TEX10Q9NXF1 929 aaPredicted RBP5.66□□□□□ -1.5
HMGB3-202ENST00000419110 TMEM181Q9P2C4 612 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 MAP10Q9P2G4 905 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 KLHL3Q9UH77 587 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 PILRAQ9UKJ1 303 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 ANGPTL2Q9UKU9 493 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 PLCL2Q9UPR0 1127 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 POMPQ9Y244 141 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 MRPS33Q9Y291 106 aaKnown RBP5.66□□□□□ -1.5
HMGB3-202ENST00000419110 SPTBP11277 2137 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 ASCC3Q8N3C0 2202 aaKnown RBP5.66□□□□□ -1.5
HMGB3-202ENST00000419110 EXPH5Q8NEV8 1989 aa5.66□□□□□ -1.5
HMGB3-202ENST00000419110 CACNA1HO95180 2353 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 TRBV5-3A0A0A0MS03 114 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 RNF103-CHMP3A0A140T963 221 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 PRSS51A0A1B0GVH4 220 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 CPED1A4D0V7 1026 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 BLACEA4D250 179 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 FAM181BA6NEQ2 426 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 ZNF860A6NHJ4 632 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms