RNA–Protein interactions for RNA: ENST00000419020.1

DDX39B-205, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-205ENST00000419020 ZFP3Q96NJ6 502 aa10.58□□□□□ -0.72
DDX39B-205ENST00000419020 PANX3Q96QZ0 392 aa10.58□□□□□ -0.72
DDX39B-205ENST00000419020 FERMT1Q9BQL6 677 aa10.58□□□□□ -0.72
DDX39B-205ENST00000419020 RHBGQ9H310 441 aa10.58□□□□□ -0.72
DDX39B-205ENST00000419020 SLC2A6Q9UGQ3 507 aa10.58□□□□□ -0.72
DDX39B-205ENST00000419020 LCMT1Q9UIC8 334 aa10.58□□□□□ -0.72
DDX39B-205ENST00000419020 CLDN16Q9Y5I7 305 aa10.58□□□□□ -0.72
DDX39B-205ENST00000419020 NINQ8N4C6 2090 aa10.57□□□□□ -0.72
DDX39B-205ENST00000419020 KMT2CQ8NEZ4 4911 aaKnown RBP10.57□□□□□ -0.72
DDX39B-205ENST00000419020 IGHV4-30-2A0A087WSY4 118 aa10.57□□□□□ -0.72
DDX39B-205ENST00000419020 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.57□□□□□ -0.72
DDX39B-205ENST00000419020 ZNF839A8K0R7 811 aa10.57□□□□□ -0.72
DDX39B-205ENST00000419020 TGFBR3LH3BV60 316 aa10.57□□□□□ -0.72
DDX39B-205ENST00000419020 PSMD12O00232 456 aaPredicted RBP10.57□□□□□ -0.72
DDX39B-205ENST00000419020 UBFD1O14562 309 aaKnown RBP10.57□□□□□ -0.72
DDX39B-205ENST00000419020 PSIP1O75475 530 aaKnown RBP10.57□□□□□ -0.72
DDX39B-205ENST00000419020 TNFSF13O75888 250 aa10.57□□□□□ -0.72
DDX39B-205ENST00000419020 IGHV4-39P01824 125 aa10.57□□□□□ -0.72
DDX39B-205ENST00000419020 IGFBP5P24593 272 aa10.57□□□□□ -0.72
DDX39B-205ENST00000419020 HRH2P25021 359 aa10.57□□□□□ -0.72
DDX39B-205ENST00000419020 CD79BP40259 229 aa10.57□□□□□ -0.72
DDX39B-205ENST00000419020 RCAN2Q14206 197 aa10.57□□□□□ -0.72
DDX39B-205ENST00000419020 ZNF791Q3KP31 576 aaPredicted RBP10.57□□□□□ -0.72
DDX39B-205ENST00000419020 LRRC38Q5VT99 294 aa10.57□□□□□ -0.72
DDX39B-205ENST00000419020 ALKBH5Q6P6C2 394 aaKnown RBP10.57□□□□□ -0.72
DDX39B-205ENST00000419020 KLHDC8BQ8IXV7 354 aa10.57□□□□□ -0.72
DDX39B-205ENST00000419020 PPHLN1Q8NEY8 458 aaKnown RBP10.57□□□□□ -0.72
DDX39B-205ENST00000419020 OR4L1Q8NH43 312 aa10.57□□□□□ -0.72
DDX39B-205ENST00000419020 ZPLD1Q8TCW7 415 aa10.57□□□□□ -0.72
DDX39B-205ENST00000419020 PAQR8Q8TEZ7 354 aa10.57□□□□□ -0.72
DDX39B-205ENST00000419020 MRFAP1L1Q96HT8 127 aa10.57□□□□□ -0.72
DDX39B-205ENST00000419020 FAM111AQ96PZ2 611 aa10.57□□□□□ -0.72
DDX39B-205ENST00000419020 TNFRSF13CQ96RJ3 184 aa10.57□□□□□ -0.72
DDX39B-205ENST00000419020 UGT2B28Q9BY64 529 aa10.57□□□□□ -0.72
DDX39B-205ENST00000419020 P2RY12Q9H244 342 aa10.57□□□□□ -0.72
DDX39B-205ENST00000419020 SH2B3Q9UQQ2 575 aa10.57□□□□□ -0.72
DDX39B-205ENST00000419020 PCDHA13Q9Y5I0 950 aa10.57□□□□□ -0.72
DDX39B-205ENST00000419020 MED12LQ86YW9 2145 aa10.57□□□□□ -0.72
DDX39B-205ENST00000419020 MALRD1Q5VYJ5 2156 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 LRRC14BA6NHZ5 514 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 MSTNO14793 375 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 NDUFS4O43181 175 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 CEP104O60308 925 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 LMX1BO60663 402 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 NDUFS7O75251 213 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 AVILO75366 819 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 TRAPPC6AO75865 159 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 C1QAP02745 245 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 THBS1P07996 1170 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 ZNF888P0CJ79 500 aaPredicted RBP10.56□□□□□ -0.72
DDX39B-205ENST00000419020 RNH1P13489 461 aaKnown RBP10.56□□□□□ -0.72
DDX39B-205ENST00000419020 TNNT1P13805 278 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 ZNF16P17020 682 aaPredicted RBP10.56□□□□□ -0.72
DDX39B-205ENST00000419020 CDKN1AP38936 164 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 SKP1P63208 163 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 BMPR2Q13873 1038 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 GBX1Q14549 363 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 NFKBIBQ15653 356 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 NHSL2Q5HYW2 709 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 SCUBE1Q8IWY4 988 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 DEPDC4Q8N2C3 294 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 ZNF321PQ8N8H1 164 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 PANX2Q96RD6 677 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 TM9SF2Q99805 663 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 FAM129AQ9BZQ8 928 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 FAM114A2Q9NRY5 505 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 MMACHCQ9Y4U1 282 aa10.56□□□□□ -0.72
DDX39B-205ENST00000419020 H7C0C1 242 aa10.55□□□□□ -0.72
DDX39B-205ENST00000419020 KLF4O43474 513 aa10.55□□□□□ -0.72
DDX39B-205ENST00000419020 TCF21O43680 179 aa10.55□□□□□ -0.72
DDX39B-205ENST00000419020 SMNDC1O75940 238 aaKnown RBP eCLIP10.55□□□□□ -0.721e-323■■■□□ 18.2
DDX39B-205ENST00000419020 LRATO95237 230 aa10.55□□□□□ -0.72
DDX39B-205ENST00000419020 ACSL3O95573 720 aa10.55□□□□□ -0.72
DDX39B-205ENST00000419020 SOD3P08294 240 aa10.55□□□□□ -0.72
DDX39B-205ENST00000419020 CYP4B1P13584 511 aa10.55□□□□□ -0.72
DDX39B-205ENST00000419020 ITGA2P17301 1181 aa10.55□□□□□ -0.72
DDX39B-205ENST00000419020 PPARGP37231 505 aaPredicted RBP10.55□□□□□ -0.72
DDX39B-205ENST00000419020 ATP5OP48047 213 aa10.55□□□□□ -0.72
DDX39B-205ENST00000419020 CDK9P50750 372 aaKnown RBP10.55□□□□□ -0.72
DDX39B-205ENST00000419020 RNF4P78317 190 aa10.55□□□□□ -0.72
DDX39B-205ENST00000419020 FASTKD1Q53R41 847 aaKnown RBP10.55□□□□□ -0.72
DDX39B-205ENST00000419020 BEX5Q5H9J7 111 aa10.55□□□□□ -0.72
DDX39B-205ENST00000419020 FAM120AOSQ5T036 256 aa10.55□□□□□ -0.72
DDX39B-205ENST00000419020 CYB5R2Q6BCY4 276 aa10.55□□□□□ -0.72
DDX39B-205ENST00000419020 ZNF474Q6S9Z5 364 aaPredicted RBP10.55□□□□□ -0.72
DDX39B-205ENST00000419020 MILR1Q7Z6M3 343 aa10.55□□□□□ -0.72
DDX39B-205ENST00000419020 MFSD9Q8NBP5 474 aa10.55□□□□□ -0.72
DDX39B-205ENST00000419020 AKAP1Q92667 903 aaKnown RBP eCLIP10.55□□□□□ -0.72
DDX39B-205ENST00000419020 GTPBP3Q969Y2 492 aaKnown RBP10.55□□□□□ -0.72
DDX39B-205ENST00000419020 FAM136AQ96C01 138 aa10.55□□□□□ -0.72
DDX39B-205ENST00000419020 LRRC45Q96CN5 670 aa10.55□□□□□ -0.72
DDX39B-205ENST00000419020 TUBA1CQ9BQE3 449 aa10.55□□□□□ -0.72
DDX39B-205ENST00000419020 PACSIN1Q9BY11 444 aa10.55□□□□□ -0.72
DDX39B-205ENST00000419020 C12orf65Q9H3J6 166 aaKnown RBP10.55□□□□□ -0.72
DDX39B-205ENST00000419020 ACBD3Q9H3P7 528 aa10.55□□□□□ -0.72
DDX39B-205ENST00000419020 ADAP2Q9NPF8 381 aa10.55□□□□□ -0.72
DDX39B-205ENST00000419020 HOMER3Q9NSC5 361 aa10.55□□□□□ -0.72
DDX39B-205ENST00000419020 DDX56Q9NY93 547 aaKnown RBP10.55□□□□□ -0.72
DDX39B-205ENST00000419020 MARCH4Q9P2E8 410 aaPredicted RBP10.55□□□□□ -0.72
DDX39B-205ENST00000419020 LIPT1Q9Y234 373 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms