RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 TSC22D4Q9Y3Q8 395 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 PCDHGA11Q9Y5H2 935 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 CLDN16Q9Y5I7 305 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 SCN2AQ99250 2005 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 LRRK2Q5S007 2527 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 LRRC14BA6NHZ5 514 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 GABRR3A8MPY1 467 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 TRIM49D1C9J1S8 452 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 TGFBR3LH3BV60 316 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 UGDHO60701 494 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 CTNSO60931 367 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 SCELO95171 688 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 CRYABP02511 175 aaKnown RBP15.4■□□□□ 0.06
LINC00404-201ENST00000418660 ABHD2P08910 425 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 GP1BBP13224 206 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 PIK3CBP42338 1070 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 GTF2H2Q13888 395 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 TSNAXIP1Q2TAA8 658 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 AP5B1Q2VPB7 878 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 DEPDC1Q5TB30 811 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 KHDRBS2Q5VWX1 349 aaKnown RBP15.4■□□□□ 0.06
LINC00404-201ENST00000418660 GTF2H2CQ6P1K8 395 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 ZNF793Q6ZN11 406 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 TRMT10CQ7L0Y3 403 aaKnown RBP15.4■□□□□ 0.06
LINC00404-201ENST00000418660 MYLK4Q86YV6 388 aaPredicted RBP15.4■□□□□ 0.06
LINC00404-201ENST00000418660 ACOT4Q8N9L9 421 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 MDS2Q8NDY4 140 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 HUS1BQ8NHY5 278 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 NR4A3Q92570 626 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 SIGLEC12Q96PQ1 595 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 CSF3RQ99062 836 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 DEFB126Q9BYW3 111 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 OR51B5Q9H339 312 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 IPPKQ9H8X2 491 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 PNO1Q9NRX1 252 aaKnown RBP15.4■□□□□ 0.06
LINC00404-201ENST00000418660 ERRFI1Q9UJM3 462 aaPredicted RBP15.4■□□□□ 0.06
LINC00404-201ENST00000418660 PPIEQ9UNP9 301 aaKnown RBP15.4■□□□□ 0.06
LINC00404-201ENST00000418660 ESPL1Q14674 2120 aa15.4■□□□□ 0.06
LINC00404-201ENST00000418660 EXOC1LA0A1B0GW35 172 aa15.39■□□□□ 0.05
LINC00404-201ENST00000418660 H0YIV9 168 aa15.39■□□□□ 0.05
LINC00404-201ENST00000418660 RTCAO00442 366 aaKnown RBP15.39■□□□□ 0.05
LINC00404-201ENST00000418660 SH3BGRLO75368 114 aa15.39■□□□□ 0.05
LINC00404-201ENST00000418660 MYO1DO94832 1006 aa15.39■□□□□ 0.05
LINC00404-201ENST00000418660 SIX3O95343 332 aaPredicted RBP15.39■□□□□ 0.05
LINC00404-201ENST00000418660 SNRPAP09012 282 aaKnown RBP15.39■□□□□ 0.05
LINC00404-201ENST00000418660 CD46P15529 392 aa15.39■□□□□ 0.05
LINC00404-201ENST00000418660 HIST1H1TP22492 207 aaPredicted RBP15.39■□□□□ 0.05
LINC00404-201ENST00000418660 TDGF1P3P51864 188 aa15.39■□□□□ 0.05
LINC00404-201ENST00000418660 MLF1P58340 268 aa15.39■□□□□ 0.05
LINC00404-201ENST00000418660 OC90Q02509 493 aaPredicted RBP15.39■□□□□ 0.05
LINC00404-201ENST00000418660 DDX39BQ13838 428 aaKnown RBP15.39■□□□□ 0.05
LINC00404-201ENST00000418660 OR1C1Q15619 314 aa15.39■□□□□ 0.05
LINC00404-201ENST00000418660 LGSNQ5TDP6 509 aa15.39■□□□□ 0.05
LINC00404-201ENST00000418660 SPINK14Q6IE38 97 aa15.39■□□□□ 0.05
LINC00404-201ENST00000418660 GOLGA7Q7Z5G4 137 aa15.39■□□□□ 0.05
LINC00404-201ENST00000418660 ARMC10Q8N2F6 343 aa15.39■□□□□ 0.05
LINC00404-201ENST00000418660 HORMAD2Q8N7B1 307 aa15.39■□□□□ 0.05
LINC00404-201ENST00000418660 PTGR2Q8N8N7 351 aaPredicted RBP15.39■□□□□ 0.05
LINC00404-201ENST00000418660 APCDD1LQ8NCL9 501 aa15.39■□□□□ 0.05
LINC00404-201ENST00000418660 REPS1Q96D71 796 aa15.39■□□□□ 0.05
LINC00404-201ENST00000418660 SCYL1Q96KG9 808 aa15.39■□□□□ 0.05
LINC00404-201ENST00000418660 ADAP2Q9NPF8 381 aa15.39■□□□□ 0.05
LINC00404-201ENST00000418660 DMRT3Q9NQL9 472 aa15.39■□□□□ 0.05
LINC00404-201ENST00000418660 ANKRD10Q9NXR5 420 aa15.39■□□□□ 0.05
LINC00404-201ENST00000418660 XPR1Q9UBH6 696 aa15.39■□□□□ 0.05
LINC00404-201ENST00000418660 SPACA6W5XKT8 324 aa15.39■□□□□ 0.05
LINC00404-201ENST00000418660 PTPN13Q12923 2485 aa15.39■□□□□ 0.05
LINC00404-201ENST00000418660 RP1L1Q8IWN7 2480 aaPredicted RBP15.39■□□□□ 0.05
LINC00404-201ENST00000418660 CNTRLQ7Z7A1 2325 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 WIPF3A6NGB9 483 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 STX16-NPEPL1H3BU86 382 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 SAP18O00422 153 aaKnown RBP15.38■□□□□ 0.05
LINC00404-201ENST00000418660 STX16O14662 325 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 SMIM24O75264 130 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 RHOXF2BP0C7M4 288 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 RNF224P0DH78 156 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 PTX3P26022 381 aaPredicted RBP15.38■□□□□ 0.05
LINC00404-201ENST00000418660 TPP2P29144 1249 aaPredicted RBP15.38■□□□□ 0.05
LINC00404-201ENST00000418660 EEF1DP29692 281 aaKnown RBP15.38■□□□□ 0.05
LINC00404-201ENST00000418660 PPP2R1BP30154 601 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 SSR2P43308 183 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 ST13P50502 369 aaKnown RBP15.38■□□□□ 0.05
LINC00404-201ENST00000418660 CLCN2P51788 898 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 GPR143P51810 404 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 ARFIP1P53367 373 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 PHEXP78562 749 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 ELAVL1Q15717 326 aaKnown RBP15.38■□□□□ 0.05
LINC00404-201ENST00000418660 OR4C11Q6IEV9 310 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 CLNKQ7Z7G1 428 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 TMEM132CQ8N3T6 1108 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 RNF175Q8N4F7 328 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 L3MBTL4Q8NA19 623 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 RGMAQ96B86 450 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 VMP1Q96GC9 406 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 SCMH1Q96GD3 660 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 C5orf34Q96MH7 638 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 MTERF1Q99551 399 aaKnown RBP15.38■□□□□ 0.05
LINC00404-201ENST00000418660 MAPKAP1Q9BPZ7 522 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 RHOXF2Q9BQY4 288 aa15.38■□□□□ 0.05
LINC00404-201ENST00000418660 CENPKQ9BS16 269 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms