RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 SDCCAG3Q96C92 435 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 THAP11Q96EK4 314 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 ZBED6CLQ96FA7 236 aaPredicted RBP8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 RMND5BQ96G75 393 aaPredicted RBP8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 HSH2DQ96JZ2 352 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 KCNC2Q96PR1 638 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 MYCBPQ99417 103 aaPredicted RBP8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 GAS2L1Q99501 681 aaPredicted RBP8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 CXorf36Q9H7Y0 433 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 PRDM7Q9NQW5 492 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 POT1Q9NUX5 634 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 TEX10Q9NXF1 929 aaPredicted RBP8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 TUBA8Q9NY65 449 aaPredicted RBP8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 VNN3Q9NY84 501 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 DUSP12Q9UNI6 340 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 FAF1Q9UNN5 650 aaPredicted RBP8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 MYRFQ9Y2G1 1151 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 PADI2Q9Y2J8 665 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 ZNF451Q9Y4E5 1061 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 ASB4Q9Y574 426 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 SCN3AQ9NY46 2000 aa8.61□□□□□ -1.03
LINCMD1-201ENST00000418518 KIR2DS5A0A0G2JLQ3 304 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 A0A0G2JNG1 304 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 SPTY2D1-AS1A0A0U1RR47 76 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 E9PQ18 207 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 KIR2DS3K7RE56 304 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 BTN3A3O00478 584 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 VILLO15195 856 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 MAP3K13O43283 966 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 GUCY1B2O75343 617 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 RASGRP1O95267 797 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 SNAP29O95721 258 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 ZNF682O95780 498 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 CLPTM1O96005 669 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 TNFP01375 233 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 ALBP02768 609 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 FABP3P05413 133 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 GNAO1P09471 354 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 ITGAMP11215 1152 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 ETFAP13804 333 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 FPR1P21462 350 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 HIST1H1TP22492 207 aaPredicted RBP8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 ATP5A1P25705 553 aaKnown RBP8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 ALDH3B2P48448 385 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 NR1H2P55055 460 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 STXBP1P61764 594 aaKnown RBP8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 KCNJ10P78508 379 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 VLDLRP98155 873 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 ILF3Q12906 894 aaKnown RBP eCLIP8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 EIF2B5Q13144 721 aaKnown RBP8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 SCARB2Q14108 478 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 KIR2DS5Q14953 304 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 CEBPEQ15744 281 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 PRRT3Q5FWE3 981 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 TMEM31Q5JXX7 168 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 BORAQ6PGQ7 559 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 IYDQ6PHW0 289 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 TMEM64Q6YI46 380 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 ADCK2Q7Z695 626 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 TMEM179BQ7Z7N9 219 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 STK32CQ86UX6 486 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 PLD3Q8IV08 490 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 CLEC4FQ8N1N0 589 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 AMER3Q8N944 861 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 CCL4L1Q8NHW4 92 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 MAGEE2Q8TD90 523 aaPredicted RBP8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 ADAMTS16Q8TE57 1224 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 RSC1A1Q92681 617 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 GAL3ST3Q96A11 431 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 TM4SF19Q96DZ7 209 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 TOE1Q96GM8 510 aaKnown RBP8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 MBOAT4Q96T53 435 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 FAIM2Q9BWQ8 316 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 GSDMCQ9BYG8 508 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 NLNQ9BYT8 704 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 PCED1AQ9H1Q7 454 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 SYNPO2LQ9H987 977 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 CLK4Q9HAZ1 481 aaKnown RBP8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 A4GALTQ9NPC4 353 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 PRDM9Q9NQV7 894 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 THSD1Q9NS62 852 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 ADPRHL2Q9NX46 363 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 LYARQ9NX58 379 aaKnown RBP8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 APOBEC3BQ9UH17 382 aaKnown RBP8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 TMEFF2Q9UIK5 374 aaPredicted RBP8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 NDRG2Q9UN36 371 aaKnown RBP8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 ABCG2Q9UNQ0 655 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 CYP8B1Q9UNU6 501 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 ENTPD2Q9Y5L3 495 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 SZT2Q5T011 3432 aa8.6□□□□□ -1.03
LINCMD1-201ENST00000418518 KNL1Q8NG31 2342 aa8.59□□□□□ -1.03
LINCMD1-201ENST00000418518 THADAQ6YHU6 1953 aa8.59□□□□□ -1.03
LINCMD1-201ENST00000418518 IGHV1OR15-9A0A0B4J2B8 117 aa8.59□□□□□ -1.03
LINCMD1-201ENST00000418518 A0A1W2PPC4 97 aa8.59□□□□□ -1.03
LINCMD1-201ENST00000418518 MYO1GB0I1T2 1018 aa8.59□□□□□ -1.03
LINCMD1-201ENST00000418518 ISM1B1AKI9 464 aa8.59□□□□□ -1.03
LINCMD1-201ENST00000418518 PPM1DO15297 605 aa8.59□□□□□ -1.03
LINCMD1-201ENST00000418518 SLC16A6O15403 523 aa8.59□□□□□ -1.03
LINCMD1-201ENST00000418518 ERI3O43414 337 aaKnown RBP8.59□□□□□ -1.03
LINCMD1-201ENST00000418518 SUV39H1O43463 412 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms