RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 GPR137BO60478 399 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 LMX1BO60663 402 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 CTSVO60911 334 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 TBX10O75333 385 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 SPAG7O75391 227 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 TM7SF2O76062 418 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 LDLRP01130 860 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 IGLV2-11P01706 119 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 LIPFP07098 398 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 ANPEPP15144 967 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 CYP11B1P15538 503 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 GJA1P17302 382 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 ACAT1P24752 427 aaKnown RBP2.49□□□□□ -2.01
VPS41-206ENST00000418457 ADSSP30520 456 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 RPA3P35244 121 aaPredicted RBP2.49□□□□□ -2.01
VPS41-206ENST00000418457 RFC4P35249 363 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 COPB2P35606 906 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 RANBP1P43487 201 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 NSFP46459 744 aaKnown RBP2.49□□□□□ -2.01
VPS41-206ENST00000418457 KCNJ1P48048 391 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 HSPA13P48723 471 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 MARCKSL1P49006 195 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 ACADVLP49748 655 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 GPC3P51654 580 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 HSD17B4P51659 736 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 VAMP7P51809 220 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 PRELPP51888 382 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 ACTR3P61158 418 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 SIRPAP78324 504 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 GCNT1Q02742 428 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 SULT2A1Q06520 285 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 GABPAQ06546 454 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 KRTAP1-1Q07627 177 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 PLA2G7Q13093 441 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 PPP2R5CQ13362 524 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 GRAPQ13588 217 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 CYLC2Q14093 348 aaPredicted RBP2.49□□□□□ -2.01
VPS41-206ENST00000418457 MELKQ14680 651 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 TNIP1Q15025 636 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 TOMM20Q15388 145 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 UBE2SQ16763 222 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 DUOXA1Q1HG43 343 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 QRICH1Q2TAL8 776 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 CNPY1Q3B7I2 92 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 USH1GQ495M9 461 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 ACSBG2Q5FVE4 666 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 GCNT6Q5T4J0 391 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 NDUFAF5Q5TEU4 345 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 C4orf22Q6V702 233 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 C1orf186Q6ZWK4 172 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 ARCQ7LC44 396 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 PIWIL4Q7Z3Z4 852 aaKnown RBP2.49□□□□□ -2.01
VPS41-206ENST00000418457 SMIM29Q86T20 159 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 NFE4Q86UQ8 179 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 LRRC6Q86X45 466 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 DNAAF5Q86Y56 855 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 PTOV1Q86YD1 416 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 CROCCP3Q8IVE0 287 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 RCOR2Q8IZ40 523 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 SYCP3Q8IZU3 236 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 SCML4Q8N228 414 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 MINDY1Q8N5J2 469 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 ALLCQ8N6M5 410 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 BANPQ8N9N5 519 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 LMNTD1Q8N9Z9 388 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 XXYLT1Q8NBI6 393 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 GMCL1P1Q8NEA9 526 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 FBXL13Q8NEE6 735 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 SLC24A4Q8NFF2 622 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 DDI1Q8WTU0 396 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 PTPMT1Q8WUK0 201 aaPredicted RBP2.49□□□□□ -2.01
VPS41-206ENST00000418457 NAT14Q8WUY8 206 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 C1orf54Q8WWF1 131 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 DGCR14Q96DF8 476 aaKnown RBP2.49□□□□□ -2.01
VPS41-206ENST00000418457 SCRN2Q96FV2 425 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 ZNF582Q96NG8 517 aaPredicted RBP2.49□□□□□ -2.01
VPS41-206ENST00000418457 CATSPER2Q96P56 530 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 FNBP1Q96RU3 617 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 SLC22A12Q96S37 553 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 CDRT15Q96T59 188 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 CYTH2Q99418 400 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 RIT2Q99578 217 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 HSD17B14Q9BPX1 270 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 SLX1AQ9BQ83 275 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 TSSK1BQ9BXA7 367 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 MRPS26Q9BYN8 205 aaKnown RBP2.49□□□□□ -2.01
VPS41-206ENST00000418457 KRTAP9-8Q9BYQ0 159 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 IQCGQ9H095 443 aaKnown RBP2.49□□□□□ -2.01
VPS41-206ENST00000418457 PPIL3Q9H2H8 161 aaKnown RBP2.49□□□□□ -2.01
VPS41-206ENST00000418457 MMP27Q9H306 513 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 VPS37BQ9H9H4 285 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.49□□□□□ -2.01
VPS41-206ENST00000418457 ZFP57Q9NU63 452 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 MRGBPQ9NV56 204 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 RAB20Q9NX57 234 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 MIOSQ9NXC5 875 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 TAS2R1Q9NYW7 299 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 HACD3Q9P035 362 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 TAAR2Q9P1P5 351 aa2.49□□□□□ -2.01
VPS41-206ENST00000418457 NYAP2Q9P242 653 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms