RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 FER1L6Q2WGJ9 1857 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 TMEM233B4DJY2 109 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 MT-ND5P03915 603 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 OR12D1P0DN82 309 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 ATF6P18850 670 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 GRIA2P42262 883 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 OGDHQ02218 1023 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 PTPRCAPQ14761 206 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 OLFML1Q6UWY5 402 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 Q6ZVL8 140 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 ZER1Q7Z7L7 766 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 OR4K1Q8NGD4 311 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 GNPDA2Q8TDQ7 276 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 CGREF1Q99674 301 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 RMI1Q9H9A7 625 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 OAZ3Q9UMX2 235 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 PRAMEF11O60813 436 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 KCNJ13O60928 360 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 SCGB2A1O75556 95 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 GNRHRP30968 328 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 GGT5P36269 586 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 KCNC3Q14003 757 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 OSTM1Q86WC4 334 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 MINDY2Q8NBR6 621 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 NUP43Q8NFH3 380 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 MOAP1Q96BY2 351 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 EBF4Q9BQW3 602 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 NSUN3Q9H649 340 aaKnown RBP10.81□□□□□ -0.68
PTCH1-205ENST00000418258 NLE1Q9NVX2 485 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-205ENST00000418258 FAM120CQ9NX05 1096 aaKnown RBP10.81□□□□□ -0.68
PTCH1-205ENST00000418258 CACNA1SQ13698 1873 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 M0R036 132 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 F2P00734 622 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 EBLN1P0CF75 366 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 S1PR1P21453 382 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 EDNRBP24530 442 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 E2F1Q01094 437 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 SEC23BQ15437 767 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 NSDHLQ15738 373 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 LRIT3Q3SXY7 679 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 NKAPLQ5M9Q1 402 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 OR8K3Q8NH51 312 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 SPRYD4Q8WW59 207 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-205ENST00000418258 TSSK6Q9BXA6 273 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 RHCGQ9UBD6 479 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 LCHNA4D1U4 455 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 BHMG1C9JSJ3 638 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-205ENST00000418258 G6PDP11413 515 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 BDH1Q02338 343 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 ELAVL3Q14576 367 aaKnown RBP10.8□□□□□ -0.68
PTCH1-205ENST00000418258 SYCE2Q6PIF2 218 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 UBR2Q8IWV8 1755 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 CMASQ8NFW8 434 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-205ENST00000418258 OR13C3Q8NGS6 347 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 ELP5Q8TE02 316 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 STON2Q8WXE9 905 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 NECAB3Q96P71 396 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-205ENST00000418258 NELFAQ9H3P2 528 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 IGKV6D-41A0A0C4DH26 115 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 A6NL46 340 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 PROM1O43490 865 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 RAD51DO75771 328 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 PRKD3O94806 890 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 PLATP00750 562 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 RORAP35398 523 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 FASLGP48023 281 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 COL9A2Q14055 689 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-205ENST00000418258 TGFBIQ15582 683 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 SMYD5Q6GMV2 418 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 SLC39A4Q6P5W5 647 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 ZC3HC1Q86WB0 502 aaKnown RBP10.8□□□□□ -0.68
PTCH1-205ENST00000418258 ERI1Q8IV48 349 aaKnown RBP10.8□□□□□ -0.68
PTCH1-205ENST00000418258 GLYATL1Q969I3 302 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 NUDT15Q9NV35 164 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 PCDHGA10Q9Y5H3 936 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-205ENST00000418258 GJB5O95377 273 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 RPL26P61254 145 aaKnown RBP10.8□□□□□ -0.68
PTCH1-205ENST00000418258 REEP3Q6NUK4 255 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 CSNK1A1LQ8N752 337 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 HORMAD2Q8N7B1 307 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 C9orf43Q8TAL5 461 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-205ENST00000418258 OR51I1Q9H343 314 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 SEC14L5O43304 696 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 RAB2BQ8WUD1 216 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 TSGA13Q96PP4 275 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 KCNA7Q96RP8 456 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 TPSD1Q9BZJ3 242 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 KCNN3Q9UGI6 736 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 RARRES3Q9UL19 164 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 DUOX1Q9NRD9 1551 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 NWD2Q9ULI1 1742 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 VSTM2BA6NLU5 285 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 CXorf49A8MYA2 514 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-205ENST00000418258 PDLIM1O00151 329 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 HOXB9P17482 250 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-205ENST00000418258 UQCRC2P22695 453 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 GGT2P36268 569 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 PBX1P40424 430 aa10.8□□□□□ -0.68
PTCH1-205ENST00000418258 RPS15AP62244 130 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms