RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 LYRM4Q9HD34 91 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 PRDM7Q9NQW5 492 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 PNO1Q9NRX1 252 aaKnown RBP14.35□□□□□ -0.11
NUP50-204ENST00000417702 PCDHGA11Q9Y5H2 935 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 SPACA6W5XKT8 324 aa14.35□□□□□ -0.11
NUP50-204ENST00000417702 GABRR3A8MPY1 467 aa14.34□□□□□ -0.11
NUP50-204ENST00000417702 UGDHO60701 494 aa14.34□□□□□ -0.11
NUP50-204ENST00000417702 SMIM24O75264 130 aa14.34□□□□□ -0.11
NUP50-204ENST00000417702 SEMA7AO75326 666 aa14.34□□□□□ -0.11
NUP50-204ENST00000417702 SH3BGRLO75368 114 aa14.34□□□□□ -0.11
NUP50-204ENST00000417702 RASAL1O95294 804 aa14.34□□□□□ -0.11
NUP50-204ENST00000417702 SLU7O95391 586 aaKnown RBP14.34□□□□□ -0.11
NUP50-204ENST00000417702 ABHD2P08910 425 aa14.34□□□□□ -0.11
NUP50-204ENST00000417702 SNRPAP09012 282 aaKnown RBP14.34□□□□□ -0.11
NUP50-204ENST00000417702 ATP5A1P25705 553 aaKnown RBP14.34□□□□□ -0.11
NUP50-204ENST00000417702 ARL1P40616 181 aaPredicted RBP14.34□□□□□ -0.11
NUP50-204ENST00000417702 PIK3CBP42338 1070 aa14.34□□□□□ -0.11
NUP50-204ENST00000417702 RAP1GDS1P52306 607 aa14.34□□□□□ -0.11
NUP50-204ENST00000417702 OC90Q02509 493 aaPredicted RBP14.34□□□□□ -0.11
NUP50-204ENST00000417702 TERF2Q15554 542 aa14.34□□□□□ -0.11
NUP50-204ENST00000417702 KHDRBS2Q5VWX1 349 aaKnown RBP14.34□□□□□ -0.11
NUP50-204ENST00000417702 GOLGA7Q7Z5G4 137 aa14.34□□□□□ -0.11
NUP50-204ENST00000417702 RPS19BP1Q86WX3 136 aaKnown RBP14.34□□□□□ -0.11
NUP50-204ENST00000417702 KIF2BQ8N4N8 673 aa14.34□□□□□ -0.11
NUP50-204ENST00000417702 HORMAD2Q8N7B1 307 aa14.34□□□□□ -0.11
NUP50-204ENST00000417702 PTGR2Q8N8N7 351 aaPredicted RBP14.34□□□□□ -0.11
NUP50-204ENST00000417702 EIF1ADQ8N9N8 165 aaKnown RBP14.34□□□□□ -0.11
NUP50-204ENST00000417702 HUS1BQ8NHY5 278 aa14.34□□□□□ -0.11
NUP50-204ENST00000417702 SSC4DQ8WTU2 575 aa14.34□□□□□ -0.11
NUP50-204ENST00000417702 ATP6V1E2Q96A05 226 aa14.34□□□□□ -0.11
NUP50-204ENST00000417702 DEFB126Q9BYW3 111 aa14.34□□□□□ -0.11
NUP50-204ENST00000417702 CDCP1Q9H5V8 836 aa14.34□□□□□ -0.11
NUP50-204ENST00000417702 IPPKQ9H8X2 491 aa14.34□□□□□ -0.11
NUP50-204ENST00000417702 ZNF358Q9NW07 568 aa14.34□□□□□ -0.11
NUP50-204ENST00000417702 RELNP78509 3460 aa14.34□□□□□ -0.11
NUP50-204ENST00000417702 ICE1Q9Y2F5 2266 aa14.34□□□□□ -0.11
NUP50-204ENST00000417702 CPAMD8Q8IZJ3 1885 aa14.33□□□□□ -0.11
NUP50-204ENST00000417702 BLACEA4D250 179 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 LRRC14BA6NHZ5 514 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 CYR61O00622 381 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 CDK2AP1O14519 115 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 CTNSO60931 367 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 MYO1DO94832 1006 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 SIX3O95343 332 aaPredicted RBP14.33□□□□□ -0.12
NUP50-204ENST00000417702 CRYABP02511 175 aaKnown RBP14.33□□□□□ -0.12
NUP50-204ENST00000417702 HIST1H1TP22492 207 aaPredicted RBP14.33□□□□□ -0.12
NUP50-204ENST00000417702 CD96P40200 585 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 SSR2P43308 183 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 CLCN2P51788 898 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 HNRNPFP52597 415 aaKnown RBP14.33□□□□□ -0.12
NUP50-204ENST00000417702 TUBA3CQ13748 450 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 OR1C1Q15619 314 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 ZNF766Q5HY98 468 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 DEPDC1Q5TB30 811 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 TUBA3EQ6PEY2 450 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 ZNF793Q6ZN11 406 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 UBE3DQ7Z6J8 389 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 CLNKQ7Z7G1 428 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 ACOT4Q8N9L9 421 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 NFAM1Q8NET5 270 aaPredicted RBP14.33□□□□□ -0.12
NUP50-204ENST00000417702 B3GNT7Q8NFL0 401 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 DNAJB8Q8NHS0 232 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 RGMAQ96B86 450 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 PHF21BQ96EK2 531 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 C5orf34Q96MH7 638 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 CSF3RQ99062 836 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 NPAS2Q99743 824 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 MRPL57Q9BQC6 102 aaKnown RBP14.33□□□□□ -0.12
NUP50-204ENST00000417702 OR51B5Q9H339 312 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 ADAP2Q9NPF8 381 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 ANKRD10Q9NXR5 420 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 XPR1Q9UBH6 696 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 TSC22D4Q9Y3Q8 395 aa14.33□□□□□ -0.12
NUP50-204ENST00000417702 USP9YO00507 2555 aaPredicted RBP14.33□□□□□ -0.12
NUP50-204ENST00000417702 H0YIV9 168 aa14.32□□□□□ -0.12
NUP50-204ENST00000417702 STX16-NPEPL1H3BU86 382 aa14.32□□□□□ -0.12
NUP50-204ENST00000417702 SAP18O00422 153 aaKnown RBP14.32□□□□□ -0.12
NUP50-204ENST00000417702 RTCAO00442 366 aaKnown RBP14.32□□□□□ -0.12
NUP50-204ENST00000417702 E2F3O00716 465 aa14.32□□□□□ -0.12
NUP50-204ENST00000417702 STX16O14662 325 aa14.32□□□□□ -0.12
NUP50-204ENST00000417702 MAN1A2O60476 641 aa14.32□□□□□ -0.12
NUP50-204ENST00000417702 SCELO95171 688 aa14.32□□□□□ -0.12
NUP50-204ENST00000417702 DDAH2O95865 285 aa14.32□□□□□ -0.12
NUP50-204ENST00000417702 IFNA16P05015 189 aa14.32□□□□□ -0.12
NUP50-204ENST00000417702 CD46P15529 392 aa14.32□□□□□ -0.12
NUP50-204ENST00000417702 PTX3P26022 381 aaPredicted RBP14.32□□□□□ -0.12
NUP50-204ENST00000417702 EEF1DP29692 281 aaKnown RBP14.32□□□□□ -0.12
NUP50-204ENST00000417702 STX4Q12846 297 aa14.32□□□□□ -0.12
NUP50-204ENST00000417702 CPSF6Q16630 551 aaKnown RBP eCLIP14.32□□□□□ -0.12
NUP50-204ENST00000417702 OR4C11Q6IEV9 310 aa14.32□□□□□ -0.12
NUP50-204ENST00000417702 TMEM52Q8NDY8 209 aa14.32□□□□□ -0.12
NUP50-204ENST00000417702 C7orf57Q8NEG2 295 aa14.32□□□□□ -0.12
NUP50-204ENST00000417702 NR4A3Q92570 626 aa14.32□□□□□ -0.12
NUP50-204ENST00000417702 MTBPQ96DY7 904 aa14.32□□□□□ -0.12
NUP50-204ENST00000417702 TAAR6Q96RI8 345 aa14.32□□□□□ -0.12
NUP50-204ENST00000417702 MTERF1Q99551 399 aaKnown RBP14.32□□□□□ -0.12
NUP50-204ENST00000417702 SLX1AQ9BQ83 275 aa14.32□□□□□ -0.12
NUP50-204ENST00000417702 MRPL46Q9H2W6 279 aaKnown RBP14.32□□□□□ -0.12
NUP50-204ENST00000417702 NOL11Q9H8H0 719 aaKnown RBP14.32□□□□□ -0.12
NUP50-204ENST00000417702 DMRT3Q9NQL9 472 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms