RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 DAPP1Q9UN19 280 aa13.43□□□□□ -0.26
PAF1-202ENST00000416728 CSMD2Q7Z408 3487 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 CYR61O00622 381 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 CLGNO14967 610 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 TP73O15350 636 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 CTNSO60931 367 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 PDE9AO76083 593 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 TBX6O95947 436 aaPredicted RBP13.42□□□□□ -0.26
PAF1-202ENST00000416728 CAPN3P20807 821 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 GGT5P36269 586 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 PLGLB1Q02325 96 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 TLE4Q04727 773 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 EFTUD2Q15029 972 aaKnown RBP eCLIP13.42□□□□□ -0.262e-10■■■■■ 31.3
PAF1-202ENST00000416728 FBXO48Q5FWF7 155 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 XKR6Q5GH73 641 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 ABHD17CQ6PCB6 329 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 PAOXQ6QHF9 649 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 HSDL2Q6YN16 418 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 CEP128Q6ZU80 1094 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 VN1R5Q7Z5H4 357 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 GPSM1Q86YR5 675 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 CREG2Q8IUH2 290 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 SPATA6LQ8N4H0 392 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 SNX31Q8N9S9 440 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 OR52N2Q8NGI0 321 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 ASB5Q8WWX0 329 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 DAZLQ92904 295 aaKnown RBP13.42□□□□□ -0.26
PAF1-202ENST00000416728 PTCD3Q96EY7 689 aaKnown RBP13.42□□□□□ -0.26
PAF1-202ENST00000416728 TSPAN17Q96FV3 270 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 CSF3RQ99062 836 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 MCMBPQ9BTE3 642 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 TP63Q9H3D4 680 aaPredicted RBP13.42□□□□□ -0.26
PAF1-202ENST00000416728 LIN28AQ9H9Z2 209 aaKnown RBP13.42□□□□□ -0.26
PAF1-202ENST00000416728 PLSCR2Q9NRY7 297 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 DEPPQ9NTK1 212 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 TXNDC16Q9P2K2 825 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 MYOTQ9UBF9 498 aa13.42□□□□□ -0.26
PAF1-202ENST00000416728 TMEM200CA6NKL6 621 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 CCDC188H7C350 402 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 ACOT7O00154 380 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 FANCGO15287 622 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 TAPBPO15533 448 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 STK16O75716 305 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 PIAS1O75925 651 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 OR6B1O95007 311 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 CCDC166P0CW27 439 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 KCNC1P48547 511 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 HSPA7P48741 367 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 KRTAP10-9P60411 292 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 PPIAP62937 165 aaKnown RBP13.41□□□□□ -0.26
PAF1-202ENST00000416728 STX4Q12846 297 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 PDK4Q16654 411 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 CDKL4Q5MAI5 379 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 SULT1C3Q6IMI6 304 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 ADNP2Q6IQ32 1131 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 IL20RBQ6UXL0 311 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 MARVELD2Q8N4S9 558 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 ACBD4Q8NC06 268 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 OR2M7Q8NG81 312 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 PYROXD1Q8WU10 500 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 SREK1Q8WXA9 508 aaKnown RBP13.41□□□□□ -0.26
PAF1-202ENST00000416728 RND1Q92730 232 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 CDKL2Q92772 493 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 ESAMQ96AP7 390 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 KCNC2Q96PR1 638 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 F2RL3Q96RI0 385 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 RASL10BQ96S79 203 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 EFCAB11Q9BUY7 163 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 ALOXE3Q9BYJ1 711 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 ROGDIQ9GZN7 287 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 DEFB127Q9H1M4 99 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 CAB39LQ9H9S4 337 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 MCCC2Q9HCC0 563 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 PRM3Q9NNZ6 103 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 SMYD2Q9NRG4 433 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 CD274Q9NZQ7 290 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 ZNF490Q9ULM2 529 aaPredicted RBP13.41□□□□□ -0.26
PAF1-202ENST00000416728 MTO1Q9Y2Z2 717 aaKnown RBP13.41□□□□□ -0.26
PAF1-202ENST00000416728 SNX24Q9Y343 169 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 HRH3Q9Y5N1 445 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 SAR1BQ9Y6B6 198 aa13.41□□□□□ -0.26
PAF1-202ENST00000416728 TEP1Q99973 2627 aaKnown RBP13.4□□□□□ -0.26
PAF1-202ENST00000416728 MYOCOSA0A1B0GUC4 107 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 FAM166BA8MTA8 275 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 WWP2O00308 870 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 PHGDHO43175 533 aaKnown RBP13.4□□□□□ -0.26
PAF1-202ENST00000416728 PRAMEF4O60810 478 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 WISP3O95389 354 aaPredicted RBP13.4□□□□□ -0.26
PAF1-202ENST00000416728 STMN1P16949 149 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 TNNI3P19429 210 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 CHRNB4P30926 498 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 SOX3P41225 446 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 PAFAH1B1P43034 410 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 RPL21P46778 160 aaKnown RBP13.4□□□□□ -0.26
PAF1-202ENST00000416728 ATP6V0D1P61421 351 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 GNG11P61952 73 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 LAPTM5Q13571 262 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 SERTAD2Q14140 314 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 DOC2AQ14183 400 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 HIST2H2ACQ16777 129 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms