RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 MAGEB17A8MXT2 336 aa14.1□□□□□ -0.15
NCKIPSD-204ENST00000416649 GTPBP1O00178 669 aaKnown RBP14.1□□□□□ -0.15
NCKIPSD-204ENST00000416649 HPGDSO60760 199 aa14.1□□□□□ -0.15
NCKIPSD-204ENST00000416649 SH3BGRLO75368 114 aa14.1□□□□□ -0.15
NCKIPSD-204ENST00000416649 APOL3O95236 402 aa14.1□□□□□ -0.15
NCKIPSD-204ENST00000416649 SOX14O95416 240 aa14.1□□□□□ -0.15
NCKIPSD-204ENST00000416649 RAF1P04049 648 aa14.1□□□□□ -0.15
NCKIPSD-204ENST00000416649 ACPPP15309 386 aa14.1□□□□□ -0.15
NCKIPSD-204ENST00000416649 ACVRL1P37023 503 aa14.1□□□□□ -0.15
NCKIPSD-204ENST00000416649 EPHA5P54756 1037 aa14.1□□□□□ -0.15
NCKIPSD-204ENST00000416649 C2orf80Q0P641 193 aa14.1□□□□□ -0.15
NCKIPSD-204ENST00000416649 PCBP2Q15366 365 aaKnown RBP eCLIP14.1□□□□□ -0.155e-7■■■■■ 29.1
NCKIPSD-204ENST00000416649 TTLL9Q3SXZ7 439 aa14.1□□□□□ -0.15
NCKIPSD-204ENST00000416649 MANEALQ5VSG8 457 aa14.1□□□□□ -0.15
NCKIPSD-204ENST00000416649 FRMPD2BQ6IN97 320 aa14.1□□□□□ -0.15
NCKIPSD-204ENST00000416649 C7orf57Q8NEG2 295 aa14.1□□□□□ -0.15
NCKIPSD-204ENST00000416649 ZNF296Q8WUU4 475 aaPredicted RBP14.1□□□□□ -0.15
NCKIPSD-204ENST00000416649 POP5Q969H6 163 aaKnown RBP14.1□□□□□ -0.15
NCKIPSD-204ENST00000416649 HYKKA2RU49 373 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 FAM227AF5H4B4 570 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 ADAMDEC1O15204 470 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 SEMG1P04279 462 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 IFNA16P05015 189 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 ANXA8P13928 327 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 GPR15P49685 360 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 CCL23P55773 120 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 CLDN8P56748 225 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 CLDN20P56880 219 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 ARHGEF7Q14155 803 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 GRK1Q15835 563 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 ZNF782Q6ZMW2 699 aaPredicted RBP14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 RNF175Q8N4F7 328 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 CPA6Q8N4T0 437 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.09□□□□□ -0.152e-10■■■■■ 48.9
NCKIPSD-204ENST00000416649 NDUFAF4Q9P032 175 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 AFF4Q9UHB7 1163 aaKnown RBP14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 NCKAP1Q9Y2A7 1128 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 PROM1O43490 865 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 PDYNP01213 254 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 SYPP08247 313 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 HBQ1P09105 142 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 VEGFBP49765 207 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 HKDC1Q2TB90 917 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 LEXMQ3ZCV2 418 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 USP30Q70CQ3 517 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 ADGRD2Q7Z7M1 963 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 CFAP52Q8N1V2 620 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 STK40Q8N2I9 435 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 OR11H4Q8NGC9 324 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 AP2M1Q96CW1 435 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 MS4A7Q9GZW8 240 aaPredicted RBP14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 ATPIF1Q9UII2 106 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 PTCH2Q9Y6C5 1203 aa14.09□□□□□ -0.15
NCKIPSD-204ENST00000416649 TAPBPO15533 448 aa14.08□□□□□ -0.15
NCKIPSD-204ENST00000416649 TOXO94900 526 aa14.08□□□□□ -0.15
NCKIPSD-204ENST00000416649 HOXD4P09016 255 aaPredicted RBP14.08□□□□□ -0.15
NCKIPSD-204ENST00000416649 LHCGRP22888 699 aa14.08□□□□□ -0.15
NCKIPSD-204ENST00000416649 KELP23276 732 aa14.08□□□□□ -0.15
NCKIPSD-204ENST00000416649 GRK4P32298 578 aa14.08□□□□□ -0.15
NCKIPSD-204ENST00000416649 IRF5Q13568 498 aa14.08□□□□□ -0.15
NCKIPSD-204ENST00000416649 C1DQ13901 141 aaKnown RBP14.08□□□□□ -0.15
NCKIPSD-204ENST00000416649 ERICH5Q6P6B1 374 aa14.08□□□□□ -0.15
NCKIPSD-204ENST00000416649 SBSNQ6UWP8 590 aa14.08□□□□□ -0.15
NCKIPSD-204ENST00000416649 DEFB128Q7Z7B8 93 aa14.08□□□□□ -0.15
NCKIPSD-204ENST00000416649 OR52P1PQ8NH57 321 aa14.08□□□□□ -0.15
NCKIPSD-204ENST00000416649 ST8SIA4Q92187 359 aa14.08□□□□□ -0.15
NCKIPSD-204ENST00000416649 NELL2Q99435 816 aa14.08□□□□□ -0.15
NCKIPSD-204ENST00000416649 TLR6Q9Y2C9 796 aa14.08□□□□□ -0.15
NCKIPSD-204ENST00000416649 SPIN1Q9Y657 262 aaPredicted RBP14.08□□□□□ -0.15
NCKIPSD-204ENST00000416649 PRR23AA6NEV1 266 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 HRGP04196 525 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 SDC1P18827 310 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 HOXC13P31276 330 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 AVPR1BP47901 424 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 SRP54P61011 504 aaKnown RBP14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 EIF2B5Q13144 721 aaKnown RBP14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 GPR68Q15743 365 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 CRTC2Q53ET0 693 aaPredicted RBP14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 KLHL22Q53GT1 634 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 CLVS2Q5SYC1 327 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 CCNJQ5T5M9 372 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 BHLHB9Q6PI77 547 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 TMCO2Q7Z6W1 182 aaPredicted RBP14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 TTC9BQ8N6N2 239 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 AQP11Q8NBQ7 271 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 MDGA1Q8NFP4 955 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 DBF4BQ8NFT6 615 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 GPR137Q96N19 417 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 SLC28A3Q9HAS3 691 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 HMX1Q9NP08 348 aaPredicted RBP14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 TLR8Q9NR97 1041 aaKnown RBP14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 NLE1Q9NVX2 485 aaPredicted RBP14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 FZD4Q9ULV1 537 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 A0A0A6YYJ9 748 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 C2orf81A6NN90 581 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 CASKO14936 926 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 AKAP8O43823 692 aaKnown RBP14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 ODC1P11926 461 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 HLA-EP13747 358 aa14.08□□□□□ -0.16
NCKIPSD-204ENST00000416649 HMGCLP35914 325 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms