RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 SLC35E2BP0CK96 405 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 ESRRAP11474 423 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 EPORP19235 508 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 CERS1P27544 350 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 MSH2P43246 934 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 GPR143P51810 404 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 GUCY2DQ02846 1103 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 DLG1Q12959 904 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 E2F2Q14209 437 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 TRADDQ15628 312 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 C3AR1Q16581 482 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 Q6ZPB1 254 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 ZNF572Q7Z3I7 529 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 CCDC91Q7Z6B0 441 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 CMC1Q7Z7K0 106 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 MRGPRGQ86SM5 289 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 ZNF227Q86WZ6 799 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 SPPL2CQ8IUH8 684 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 SIAH3Q8IW03 269 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 GHDCQ8N2G8 530 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 TMEM132CQ8N3T6 1108 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 FAM47BQ8NA70 645 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 POGLUT1Q8NBL1 392 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 TMEM52Q8NDY8 209 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 NCLNQ969V3 563 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 KCNC2Q96PR1 638 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 F2RL3Q96RI0 385 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 ATOH8Q96SQ7 321 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 TBCDQ9BTW9 1192 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 LYRM4Q9HD34 91 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 PRM3Q9NNZ6 103 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 KLF13Q9Y2Y9 288 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 KLF2Q9Y5W3 355 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 SUPT3HB4E1H0 165 aa16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 TGFBR3LH3BV60 316 aa16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 SUPT3HO75486 399 aa16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 ZFAND5O76080 213 aa16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 HNRNPFP52597 415 aaKnown RBP16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 PCDH1Q08174 1060 aa16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 ELAVL1Q15717 326 aaKnown RBP16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 ADNP2Q6IQ32 1131 aa16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 MED27Q6P2C8 311 aa16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 CHSY3Q70JA7 882 aa16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 LURAP1LQ8IV03 231 aa16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 C17orf53Q8N3J3 647 aaPredicted RBP16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 TMEM156Q8N614 296 aa16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 C7orf57Q8NEG2 295 aa16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 ZNF473Q8WTR7 871 aaKnown RBP16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 UBTD2Q8WUN7 234 aa16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 DAZLQ92904 295 aaKnown RBP16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 NXNL1Q96CM4 212 aa16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 MS4A8Q9BY19 250 aa16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 TSPAN10Q9H1Z9 355 aaPredicted RBP16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 RUBCNLQ9H714 662 aa16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 IGSF5Q9NSI5 407 aa16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 OPTCQ9UBM4 332 aa16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 ACOT9Q9Y305 439 aa16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 ASB1Q9Y576 335 aa16.4■□□□□ 0.22
PDLIM2-208ENST00000416159 A0A087X1B8 175 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 CCDC189A1A4V9 331 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 KLRC4-KLRK1H3BQV0 150 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 K7EPI3 171 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 UBXN8O00124 270 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 ITGA10O75578 1167 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 IFNA16P05015 189 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 ZNF24P17028 368 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 PPP2R1BP30154 601 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 SERPINB1P30740 379 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 GMPRP36959 345 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 CKAP4Q07065 602 aaKnown RBP16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 STX4Q12846 297 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 BMPR2Q13873 1038 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 AP5B1Q2VPB7 878 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 TMEM35AQ53FP2 167 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 XKRXQ6PP77 449 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 CLNKQ7Z7G1 428 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 TICAM1Q8IUC6 712 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 LAS2Q8IYD9 372 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 CPSF7Q8N684 471 aaKnown RBP16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 RHEBL1Q8TAI7 183 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 CSF3RQ99062 836 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 ALOXE3Q9BYJ1 711 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 KCMF1Q9P0J7 381 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 VTI1BQ9UEU0 232 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 ADGRE2Q9UHX3 823 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 ZNF223Q9UK11 482 aaPredicted RBP16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 YARS2Q9Y2Z4 477 aaKnown RBP16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 CLCA3PQ9Y6N3 262 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 SPACA6W5XKT8 324 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 CREBBPQ92793 2442 aa16.39■□□□□ 0.21
PDLIM2-208ENST00000416159 ARHGAP10A1A4S6 786 aa16.38■□□□□ 0.21
PDLIM2-208ENST00000416159 SYCE1LA8MT33 242 aa16.38■□□□□ 0.21
PDLIM2-208ENST00000416159 PCNAP12004 261 aa16.38■□□□□ 0.21
PDLIM2-208ENST00000416159 EPB42P16452 691 aa16.38■□□□□ 0.21
PDLIM2-208ENST00000416159 ATP5A1P25705 553 aaKnown RBP16.38■□□□□ 0.21
PDLIM2-208ENST00000416159 MEOX1P50221 254 aa16.38■□□□□ 0.21
PDLIM2-208ENST00000416159 SSR4P51571 173 aa16.38■□□□□ 0.21
PDLIM2-208ENST00000416159 SMSP52788 366 aa16.38■□□□□ 0.21
PDLIM2-208ENST00000416159 SLC7A5Q01650 507 aa16.38■□□□□ 0.21
PDLIM2-208ENST00000416159 SERTAD2Q14140 314 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms