RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 CCDC77Q9BR77 488 aa23.34■■□□□ 1.33
HLA-C-204ENST00000415537 PRDM7Q9NQW5 492 aa23.34■■□□□ 1.33
HLA-C-204ENST00000415537 SNX15Q9NRS6 342 aa23.34■■□□□ 1.33
HLA-C-204ENST00000415537 FBXW2Q9UKT8 454 aa23.34■■□□□ 1.33
HLA-C-204ENST00000415537 NBPF19A0A087WUL8 3843 aa23.34■■□□□ 1.33
HLA-C-204ENST00000415537 CCDC189A1A4V9 331 aa23.33■■□□□ 1.33
HLA-C-204ENST00000415537 ZG16O60844 167 aa23.33■■□□□ 1.33
HLA-C-204ENST00000415537 IFNA16P05015 189 aa23.33■■□□□ 1.33
HLA-C-204ENST00000415537 SERPINB1P30740 379 aa23.33■■□□□ 1.33
HLA-C-204ENST00000415537 HNRNPFP52597 415 aaKnown RBP23.33■■□□□ 1.33
HLA-C-204ENST00000415537 CASP6P55212 293 aa23.33■■□□□ 1.33
HLA-C-204ENST00000415537 IRF9Q00978 393 aa23.33■■□□□ 1.33
HLA-C-204ENST00000415537 E2F2Q14209 437 aa23.33■■□□□ 1.33
HLA-C-204ENST00000415537 ACAP2Q15057 778 aa23.33■■□□□ 1.33
HLA-C-204ENST00000415537 ZRSR2Q15696 482 aaKnown RBP23.33■■□□□ 1.33
HLA-C-204ENST00000415537 ZNF468Q5VIY5 522 aaPredicted RBP23.33■■□□□ 1.33
HLA-C-204ENST00000415537 KLC3Q6P597 504 aa23.33■■□□□ 1.33
HLA-C-204ENST00000415537 CHSY3Q70JA7 882 aa23.33■■□□□ 1.33
HLA-C-204ENST00000415537 CENPLQ8N0S6 344 aaPredicted RBP23.33■■□□□ 1.33
HLA-C-204ENST00000415537 APCDD1LQ8NCL9 501 aa23.33■■□□□ 1.33
HLA-C-204ENST00000415537 ZNF473Q8WTR7 871 aaKnown RBP23.33■■□□□ 1.33
HLA-C-204ENST00000415537 THAP3Q8WTV1 239 aaPredicted RBP23.33■■□□□ 1.33
HLA-C-204ENST00000415537 VMP1Q96GC9 406 aa23.33■■□□□ 1.33
HLA-C-204ENST00000415537 TBCDQ9BTW9 1192 aa23.33■■□□□ 1.33
HLA-C-204ENST00000415537 MS4A8Q9BY19 250 aa23.33■■□□□ 1.33
HLA-C-204ENST00000415537 TSPYL1Q9H0U9 437 aa23.33■■□□□ 1.33
HLA-C-204ENST00000415537 ADAP2Q9NPF8 381 aa23.33■■□□□ 1.33
HLA-C-204ENST00000415537 SUCOQ9UBS9 1254 aaKnown RBP23.33■■□□□ 1.33
HLA-C-204ENST00000415537 SPACA6W5XKT8 324 aa23.33■■□□□ 1.33
HLA-C-204ENST00000415537 MYO7BQ6PIF6 2116 aa23.33■■□□□ 1.32
HLA-C-204ENST00000415537 ASPDHA6ND91 283 aa23.32■■□□□ 1.32
HLA-C-204ENST00000415537 CYR61O00622 381 aa23.32■■□□□ 1.32
HLA-C-204ENST00000415537 CTNSO60931 367 aa23.32■■□□□ 1.32
HLA-C-204ENST00000415537 TGFB1P01137 390 aa23.32■■□□□ 1.32
HLA-C-204ENST00000415537 GFAPP14136 432 aa23.32■■□□□ 1.32
HLA-C-204ENST00000415537 TYK2P29597 1187 aa23.32■■□□□ 1.32
HLA-C-204ENST00000415537 AP5B1Q2VPB7 878 aa23.32■■□□□ 1.32
HLA-C-204ENST00000415537 TMEM35AQ53FP2 167 aa23.32■■□□□ 1.32
HLA-C-204ENST00000415537 KRTCAP3Q53RY4 240 aa23.32■■□□□ 1.32
HLA-C-204ENST00000415537 PNPLA5Q7Z6Z6 429 aaPredicted RBP23.32■■□□□ 1.32
HLA-C-204ENST00000415537 LAS2Q8IYD9 372 aa23.32■■□□□ 1.32
HLA-C-204ENST00000415537 TEX9Q8N6V9 391 aa23.32■■□□□ 1.32
HLA-C-204ENST00000415537 NCLNQ969V3 563 aa23.32■■□□□ 1.32
HLA-C-204ENST00000415537 CSF3RQ99062 836 aa23.32■■□□□ 1.32
HLA-C-204ENST00000415537 LYRM4Q9HD34 91 aa23.32■■□□□ 1.32
HLA-C-204ENST00000415537 ADGRE2Q9UHX3 823 aa23.32■■□□□ 1.32
HLA-C-204ENST00000415537 CLCA3PQ9Y6N3 262 aa23.32■■□□□ 1.32
HLA-C-204ENST00000415537 A0A096LPK6 155 aa23.31■■□□□ 1.32
HLA-C-204ENST00000415537 SH3BGRLO75368 114 aa23.31■■□□□ 1.32
HLA-C-204ENST00000415537 KLHL2O95198 593 aa23.31■■□□□ 1.32
HLA-C-204ENST00000415537 MTHFD2P13995 350 aa23.31■■□□□ 1.32
HLA-C-204ENST00000415537 PPP2R1BP30154 601 aa23.31■■□□□ 1.32
HLA-C-204ENST00000415537 TRHRP34981 398 aaPredicted RBP23.31■■□□□ 1.32
HLA-C-204ENST00000415537 SERPINB8P50452 374 aa23.31■■□□□ 1.32
HLA-C-204ENST00000415537 HLCSP50747 726 aa23.31■■□□□ 1.32
HLA-C-204ENST00000415537 PCDH1Q08174 1060 aa23.31■■□□□ 1.32
HLA-C-204ENST00000415537 STX4Q12846 297 aa23.31■■□□□ 1.32
HLA-C-204ENST00000415537 PFKFB4Q16877 469 aa23.31■■□□□ 1.32
HLA-C-204ENST00000415537 MYLK4Q86YV6 388 aaPredicted RBP23.31■■□□□ 1.32
HLA-C-204ENST00000415537 TMEM132CQ8N3T6 1108 aa23.31■■□□□ 1.32
HLA-C-204ENST00000415537 TMEM156Q8N614 296 aa23.31■■□□□ 1.32
HLA-C-204ENST00000415537 OR7G3Q8NG95 312 aa23.31■■□□□ 1.32
HLA-C-204ENST00000415537 CMTM7Q96FZ5 175 aa23.31■■□□□ 1.32
HLA-C-204ENST00000415537 GPR137Q96N19 417 aa23.31■■□□□ 1.32
HLA-C-204ENST00000415537 TRIM45Q9H8W5 580 aaPredicted RBP23.31■■□□□ 1.32
HLA-C-204ENST00000415537 NINJ2Q9NZG7 142 aa23.31■■□□□ 1.32
HLA-C-204ENST00000415537 HMX2A2RU54 273 aa23.3■■□□□ 1.32
HLA-C-204ENST00000415537 NPIPA5E9PKD4 350 aa23.3■■□□□ 1.32
HLA-C-204ENST00000415537 TGFBR3LH3BV60 316 aa23.3■■□□□ 1.32
HLA-C-204ENST00000415537 CCL21O00585 134 aa23.3■■□□□ 1.32
HLA-C-204ENST00000415537 NME2P1O60361 137 aa23.3■■□□□ 1.32
HLA-C-204ENST00000415537 NME2P22392 152 aa23.3■■□□□ 1.32
HLA-C-204ENST00000415537 ATP5A1P25705 553 aaKnown RBP23.3■■□□□ 1.32
HLA-C-204ENST00000415537 SETDB1Q15047 1291 aa23.3■■□□□ 1.32
HLA-C-204ENST00000415537 ELAVL1Q15717 326 aaKnown RBP23.3■■□□□ 1.32
HLA-C-204ENST00000415537 ZNF787Q6DD87 383 aa23.3■■□□□ 1.32
HLA-C-204ENST00000415537 GRHL2Q6ISB3 625 aa23.3■■□□□ 1.32
HLA-C-204ENST00000415537 ARMC10Q8N2F6 343 aa23.3■■□□□ 1.32
HLA-C-204ENST00000415537 MMGT1Q8N4V1 131 aa23.3■■□□□ 1.32
HLA-C-204ENST00000415537 ACOT4Q8N9L9 421 aa23.3■■□□□ 1.32
HLA-C-204ENST00000415537 MNS1Q8NEH6 495 aa23.3■■□□□ 1.32
HLA-C-204ENST00000415537 IFT81Q8WYA0 676 aa23.3■■□□□ 1.32
HLA-C-204ENST00000415537 DAZLQ92904 295 aaKnown RBP23.3■■□□□ 1.32
HLA-C-204ENST00000415537 FRMD6Q96NE9 622 aa23.3■■□□□ 1.32
HLA-C-204ENST00000415537 CENPKQ9BS16 269 aa23.3■■□□□ 1.32
HLA-C-204ENST00000415537 ALOXE3Q9BYJ1 711 aa23.3■■□□□ 1.32
HLA-C-204ENST00000415537 TSPAN10Q9H1Z9 355 aaPredicted RBP23.3■■□□□ 1.32
HLA-C-204ENST00000415537 VPS11Q9H270 941 aa23.3■■□□□ 1.32
HLA-C-204ENST00000415537 ACSS3Q9H6R3 686 aa23.3■■□□□ 1.32
HLA-C-204ENST00000415537 SH3BGRL2Q9UJC5 107 aa23.3■■□□□ 1.32
HLA-C-204ENST00000415537 NPIPA1Q9UND3 350 aa23.3■■□□□ 1.32
HLA-C-204ENST00000415537 PPIEQ9UNP9 301 aaKnown RBP23.3■■□□□ 1.32
HLA-C-204ENST00000415537 CLDN16Q9Y5I7 305 aa23.3■■□□□ 1.32
HLA-C-204ENST00000415537 IKBKGQ9Y6K9 419 aa23.3■■□□□ 1.32
HLA-C-204ENST00000415537 RTCAO00442 366 aaKnown RBP23.29■■□□□ 1.32
HLA-C-204ENST00000415537 ITGA10O75578 1167 aa23.29■■□□□ 1.32
HLA-C-204ENST00000415537 ZFAND5O76080 213 aa23.29■■□□□ 1.32
HLA-C-204ENST00000415537 HIST1H1TP22492 207 aaPredicted RBP23.29■■□□□ 1.32
HLA-C-204ENST00000415537 DCTP40126 519 aa23.29■■□□□ 1.32
HLA-C-204ENST00000415537 CA7P43166 264 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms