RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 NR1D1P20393 614 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 CPN2P22792 545 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 PPP2R1BP30154 601 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 BUD31P41223 144 aaPredicted RBP13.83□□□□□ -0.2
CHD1-202ENST00000414220 STX4Q12846 297 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 LCP2Q13094 533 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 TRAF3Q13114 568 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 SLAMF1Q13291 335 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 BIKQ13323 160 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 PCOLCEQ15113 449 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 KRT71Q3SY84 523 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 UNC50Q53HI1 259 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 PLAG1Q6DJT9 500 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 PAPD4Q6PIY7 484 aaKnown RBP13.83□□□□□ -0.2
CHD1-202ENST00000414220 LANCL3Q6ZV70 420 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 SH2D5Q6ZV89 423 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 GPRIN3Q6ZVF9 776 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 NUDT13Q86X67 352 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 SRRM1Q8IYB3 904 aaKnown RBP13.83□□□□□ -0.2
CHD1-202ENST00000414220 M1APQ8TC57 530 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 METTL6Q8TCB7 284 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 APOPT1Q96IL0 206 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 TMEM237Q96Q45 408 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 ZNF382Q96SR6 550 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 SLC29A3Q9BZD2 475 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 AICDAQ9GZX7 198 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 WDR41Q9HAD4 459 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 SLAMF7Q9NQ25 335 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 LYARQ9NX58 379 aaKnown RBP13.83□□□□□ -0.2
CHD1-202ENST00000414220 LOC400499M0QZD8 3231 aa13.83□□□□□ -0.2
CHD1-202ENST00000414220 IGSF10Q6WRI0 2623 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 DYTNA2CJ06 578 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 FAM227AF5H4B4 570 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 RTCAO00442 366 aaKnown RBP13.82□□□□□ -0.2
CHD1-202ENST00000414220 PLIN3O60664 434 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 CTNSO60931 367 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 DNAJB6O75190 326 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 GUCY1B2O75343 617 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 ULK1O75385 1050 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 SEMA3DO95025 777 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 SCELO95171 688 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 TBX6O95947 436 aaPredicted RBP13.82□□□□□ -0.2
CHD1-202ENST00000414220 ENO1P06733 434 aaKnown RBP13.82□□□□□ -0.2
CHD1-202ENST00000414220 PRR35P0CG20 571 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 HSD3B1P14060 373 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 HSD3B2P26439 372 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 CASRP41180 1078 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 NEK2P51955 445 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 DNAJB13P59910 316 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 ZNF33BQ06732 778 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 SERTAD2Q14140 314 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 SGO1Q5FBB7 561 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 IGFL3Q6UXB1 125 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 TRABD2AQ86V40 505 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 GPR180Q86V85 440 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 ZCCHC7Q8N3Z6 543 aaKnown RBP13.82□□□□□ -0.2
CHD1-202ENST00000414220 EFCAB3Q8N7B9 438 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 IMMP1LQ96LU5 166 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 BRF2Q9HAW0 419 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 KCNK13Q9HB14 408 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 MKS1Q9NXB0 559 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 ABI3Q9P2A4 366 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 PTGFRNQ9P2B2 879 aa13.82□□□□□ -0.2
CHD1-202ENST00000414220 IGHV3-20A0A0C4DH32 117 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 TCRBV16S1A1N1A0A5B0 115 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 OR2W5A6NFC9 320 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 TTLL8A6PVC2 850 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 C4orf51C9J302 202 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 K7EM74 188 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 MASP2O00187 686 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 PLPP1O14494 284 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 DYRK3O43781 588 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 OR4F21O95013 312 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 TSPAN8P19075 237 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 MAOAP21397 527 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 BTG2P78543 158 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 MFAP5Q13361 173 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 ABHD17BQ5VST6 288 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 LIPMQ5VYY2 423 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 UBE3DQ7Z6J8 389 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 CDYL2Q8N8U2 506 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 FAM47BQ8NA70 645 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 BRIX1Q8TDN6 353 aaKnown RBP13.81□□□□□ -0.2
CHD1-202ENST00000414220 TSLPQ969D9 159 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 PNPLA2Q96AD5 504 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 ZNF354BQ96LW1 612 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 ILKAPQ9H0C8 392 aaPredicted RBP13.81□□□□□ -0.2
CHD1-202ENST00000414220 STMN4Q9H169 189 aaPredicted RBP13.81□□□□□ -0.2
CHD1-202ENST00000414220 CENPHQ9H3R5 247 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 MMP25Q9NPA2 562 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 OXSMQ9NWU1 459 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 FBXW2Q9UKT8 454 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 EMCNQ9ULC0 261 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 SLC12A4Q9UP95 1085 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 PLLPQ9Y342 182 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 SCN3AQ9NY46 2000 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 CCDC88CQ9P219 2028 aa13.81□□□□□ -0.2
CHD1-202ENST00000414220 A8MUI8 341 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 FOXO6A8MYZ6 492 aa13.8□□□□□ -0.2
CHD1-202ENST00000414220 G3V2L1 256 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms