RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 PHF21BQ96EK2 531 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 CDK15Q96Q40 435 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 MAPKAP1Q9BPZ7 522 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 NTMT1Q9BV86 223 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 SORBS1Q9BX66 1292 aaKnown RBP16.28■□□□□ 0.2
HSPG2-204ENST00000412328 OR51B5Q9H339 312 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 LYRM4Q9HD34 91 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 PLA2G3Q9NZ20 509 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 TMEM216Q9P0N5 145 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 ZNF225Q9UK10 706 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 PPT2Q9UMR5 302 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 RNF11Q9Y3C5 154 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 UTP20O75691 2785 aaKnown RBP16.27■□□□□ 0.2
HSPG2-204ENST00000412328 A0A088AWK7 358 aa16.27■□□□□ 0.2
HSPG2-204ENST00000412328 TGFB1P01137 390 aa16.27■□□□□ 0.2
HSPG2-204ENST00000412328 ZNF10P21506 573 aaPredicted RBP16.27■□□□□ 0.2
HSPG2-204ENST00000412328 GPR143P51810 404 aa16.27■□□□□ 0.2
HSPG2-204ENST00000412328 FCRLBQ6BAA4 426 aa16.27■□□□□ 0.2
HSPG2-204ENST00000412328 BEST3Q8N1M1 668 aa16.27■□□□□ 0.2
HSPG2-204ENST00000412328 CISD2Q8N5K1 135 aaKnown RBP16.27■□□□□ 0.2
HSPG2-204ENST00000412328 ACOT4Q8N9L9 421 aa16.27■□□□□ 0.2
HSPG2-204ENST00000412328 DNAJB14Q8TBM8 379 aa16.27■□□□□ 0.2
HSPG2-204ENST00000412328 CMTM7Q96FZ5 175 aa16.27■□□□□ 0.2
HSPG2-204ENST00000412328 CNDP1Q96KN2 507 aa16.27■□□□□ 0.2
HSPG2-204ENST00000412328 MTERF1Q99551 399 aaKnown RBP16.27■□□□□ 0.2
HSPG2-204ENST00000412328 TBCDQ9BTW9 1192 aa16.27■□□□□ 0.2
HSPG2-204ENST00000412328 NOL11Q9H8H0 719 aaKnown RBP16.27■□□□□ 0.2
HSPG2-204ENST00000412328 ACTR8Q9H981 624 aa16.27■□□□□ 0.2
HSPG2-204ENST00000412328 ADGRE2Q9UHX3 823 aa16.27■□□□□ 0.2
HSPG2-204ENST00000412328 EMCNQ9ULC0 261 aa16.27■□□□□ 0.2
HSPG2-204ENST00000412328 OR5H15A6NDH6 313 aa16.26■□□□□ 0.19
HSPG2-204ENST00000412328 FOXO6A8MYZ6 492 aa16.26■□□□□ 0.19
HSPG2-204ENST00000412328 PSMD12O00232 456 aaPredicted RBP16.26■□□□□ 0.19
HSPG2-204ENST00000412328 SAP18O00422 153 aaKnown RBP16.26■□□□□ 0.19
HSPG2-204ENST00000412328 PPP6CO00743 305 aa16.26■□□□□ 0.19
HSPG2-204ENST00000412328 SH3BGRLO75368 114 aa16.26■□□□□ 0.19
HSPG2-204ENST00000412328 F10P00742 488 aa16.26■□□□□ 0.19
HSPG2-204ENST00000412328 ARFIP1P53367 373 aa16.26■□□□□ 0.19
HSPG2-204ENST00000412328 RPS13P62277 151 aaKnown RBP16.26■□□□□ 0.19
HSPG2-204ENST00000412328 IGLV3-21P80748 117 aaPredicted RBP16.26■□□□□ 0.19
HSPG2-204ENST00000412328 ZNF33BQ06732 778 aa16.26■□□□□ 0.19
HSPG2-204ENST00000412328 MRPL49Q13405 166 aaKnown RBP16.26■□□□□ 0.19
HSPG2-204ENST00000412328 DDX39BQ13838 428 aaKnown RBP16.26■□□□□ 0.19
HSPG2-204ENST00000412328 ACER2Q5QJU3 275 aa16.26■□□□□ 0.19
HSPG2-204ENST00000412328 ZNF324BQ6AW86 544 aaPredicted RBP16.26■□□□□ 0.19
HSPG2-204ENST00000412328 MRM1Q6IN84 353 aaKnown RBP16.26■□□□□ 0.19
HSPG2-204ENST00000412328 LCA5Q86VQ0 697 aa16.26■□□□□ 0.19
HSPG2-204ENST00000412328 ATCAYQ86WG3 371 aa16.26■□□□□ 0.19
HSPG2-204ENST00000412328 ZNF595Q8IYB9 648 aa16.26■□□□□ 0.19
HSPG2-204ENST00000412328 LGI4Q8N135 537 aa16.26■□□□□ 0.19
HSPG2-204ENST00000412328 MDS2Q8NDY4 140 aa16.26■□□□□ 0.19
HSPG2-204ENST00000412328 SCYL1Q96KG9 808 aa16.26■□□□□ 0.19
HSPG2-204ENST00000412328 TMEM237Q96Q45 408 aa16.26■□□□□ 0.19
HSPG2-204ENST00000412328 TAAR6Q96RI8 345 aa16.26■□□□□ 0.19
HSPG2-204ENST00000412328 SLX1AQ9BQ83 275 aa16.26■□□□□ 0.19
HSPG2-204ENST00000412328 ROGDIQ9GZN7 287 aa16.26■□□□□ 0.19
HSPG2-204ENST00000412328 COPS7BQ9H9Q2 264 aaPredicted RBP16.26■□□□□ 0.19
HSPG2-204ENST00000412328 PRTFDC1Q9NRG1 225 aa16.26■□□□□ 0.19
HSPG2-204ENST00000412328 PSD3Q9NYI0 1048 aa16.26■□□□□ 0.19
HSPG2-204ENST00000412328 ANGPTL3Q9Y5C1 460 aa16.26■□□□□ 0.19
HSPG2-204ENST00000412328 PCDHGA11Q9Y5H2 935 aa16.26■□□□□ 0.19
HSPG2-204ENST00000412328 DOPEY1Q5JWR5 2465 aa16.26■□□□□ 0.19
HSPG2-204ENST00000412328 A0A0A6YYD5 115 aa16.25■□□□□ 0.19
HSPG2-204ENST00000412328 ZNF500O60304 480 aaPredicted RBP16.25■□□□□ 0.19
HSPG2-204ENST00000412328 CLDN9O95484 217 aa16.25■□□□□ 0.19
HSPG2-204ENST00000412328 BSGP35613 385 aa16.25■□□□□ 0.19
HSPG2-204ENST00000412328 SSR2P43308 183 aa16.25■□□□□ 0.19
HSPG2-204ENST00000412328 HNRNPH2P55795 449 aaKnown RBP16.25■□□□□ 0.19
HSPG2-204ENST00000412328 VSNL1P62760 191 aa16.25■□□□□ 0.19
HSPG2-204ENST00000412328 ARG2P78540 354 aa16.25■□□□□ 0.19
HSPG2-204ENST00000412328 CUL3Q13618 768 aa16.25■□□□□ 0.19
HSPG2-204ENST00000412328 ZRSR2Q15696 482 aaKnown RBP16.25■□□□□ 0.19
HSPG2-204ENST00000412328 CPSF6Q16630 551 aaKnown RBP eCLIP16.25■□□□□ 0.19
HSPG2-204ENST00000412328 LETMD1Q6P1Q0 360 aa16.25■□□□□ 0.19
HSPG2-204ENST00000412328 TDRPQ86YL5 185 aa16.25■□□□□ 0.19
HSPG2-204ENST00000412328 ZCCHC7Q8N3Z6 543 aaKnown RBP16.25■□□□□ 0.19
HSPG2-204ENST00000412328 EFCAB3Q8N7B9 438 aa16.25■□□□□ 0.19
HSPG2-204ENST00000412328 SRFBP1Q8NEF9 429 aaKnown RBP16.25■□□□□ 0.19
HSPG2-204ENST00000412328 ACMSDQ8TDX5 336 aa16.25■□□□□ 0.19
HSPG2-204ENST00000412328 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.25■□□□□ 0.19
HSPG2-204ENST00000412328 KCNK13Q9HB14 408 aa16.25■□□□□ 0.19
HSPG2-204ENST00000412328 CROCCQ5TZA2 2017 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 ICE1Q9Y2F5 2266 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 IQANK1A0A1B0GTG1 560 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 A0A1W2PPM1 405 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 DYTNA2CJ06 578 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 FOXE1O00358 373 aaPredicted RBP16.24■□□□□ 0.19
HSPG2-204ENST00000412328 TMPRSS11DO60235 418 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 DLX3O60479 287 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 SMIM24O75264 130 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 EEDO75530 441 aaKnown RBP16.24■□□□□ 0.19
HSPG2-204ENST00000412328 CBX6O95503 412 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 TDGF1P3P51864 188 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 NEK2P51955 445 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 TGM3Q08188 693 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 TUBA3CQ13748 450 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 RASA2Q15283 850 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 INAQ16352 499 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 ZNF678Q5SXM1 525 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 ABHD17BQ5VST6 288 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms