RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 UBQLNLQ8IYU4 475 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 CDK20Q8IZL9 346 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 DCLK2Q8N568 766 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 NECAB1Q8N987 351 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 OR6M1Q8NGM8 313 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 TRMT10AQ8TBZ6 339 aaKnown RBP4.49□□□□□ -1.69
LSM5-205ENST00000409952 PNPT1Q8TCS8 783 aaKnown RBP4.49□□□□□ -1.69
LSM5-205ENST00000409952 EMG1Q92979 244 aaKnown RBP4.49□□□□□ -1.69
LSM5-205ENST00000409952 CXorf58Q96LI9 332 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 S1PR3Q99500 378 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 MTG1Q9BT17 334 aaPredicted RBP4.49□□□□□ -1.69
LSM5-205ENST00000409952 FUNDC2Q9BWH2 189 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 DPEP2Q9H4A9 486 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 RPAP3Q9H6T3 665 aaPredicted RBP4.49□□□□□ -1.69
LSM5-205ENST00000409952 EXO5Q9H790 373 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 RAVER2Q9HCJ3 691 aaKnown RBP4.49□□□□□ -1.69
LSM5-205ENST00000409952 FZD3Q9NPG1 666 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 OLFML3Q9NRN5 406 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 P2RX2Q9UBL9 471 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 CRLS1Q9UJA2 301 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 NCKAP1Q9Y2A7 1128 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 SLCO1B1Q9Y6L6 691 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 PIK3R4Q99570 1358 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 CUX2O14529 1486 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 ZCWPW2A0A1B0GU75 182 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 FAM240BA0A1B0GVZ2 78 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 ATP6AP2A0A1C7CYW4 349 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 RNF222A6NCQ9 220 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 LILRA5A6NI73 299 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 OR52A4PA6NMU1 304 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 C2CD4DB7Z1M9 353 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 PPIAL4DF5H284 164 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 M0QX08 132 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 SDHDO14521 159 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 SMAD6O43541 496 aaKnown RBP4.48□□□□□ -1.69
LSM5-205ENST00000409952 WDR1O75083 606 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 BCAS1O75363 584 aaPredicted RBP4.48□□□□□ -1.69
LSM5-205ENST00000409952 CYP1A2P05177 515 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 TFAP2AP05549 437 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 CAPN1P07384 714 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 POLR2MP0CAP2 368 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 ZNF44P15621 663 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 CDH3P22223 829 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 CD38P28907 300 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 GJB2P29033 226 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 CCT6AP40227 531 aaKnown RBP4.48□□□□□ -1.69
LSM5-205ENST00000409952 ALDH3B1P43353 468 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 ETV1P50549 477 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 MLLT10P55197 1068 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 PROK1P58294 105 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 RPS8P62241 208 aaKnown RBP4.48□□□□□ -1.69
LSM5-205ENST00000409952 SP3Q02447 781 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 TAF10Q12962 218 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 ZBTB17Q13105 803 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 SRSF5Q13243 272 aaKnown RBP4.48□□□□□ -1.69
LSM5-205ENST00000409952 OPCMLQ14982 345 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 ZNF528Q3MIS6 628 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 DCAF4L1Q3SXM0 396 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 MPPE1Q53F39 396 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 OTUD1Q5VV17 481 aaPredicted RBP4.48□□□□□ -1.69
LSM5-205ENST00000409952 TAF3Q5VWG9 929 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 ZNF776Q68DI1 518 aaPredicted RBP4.48□□□□□ -1.69
LSM5-205ENST00000409952 SNRNP48Q6IEG0 339 aaKnown RBP4.48□□□□□ -1.69
LSM5-205ENST00000409952 FAM122CQ6P4D5 195 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 CEACAM20Q6UY09 585 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 RAD9BQ6WBX8 426 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 COX8CQ7Z4L0 72 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 CTU1Q7Z7A3 348 aaKnown RBP4.48□□□□□ -1.69
LSM5-205ENST00000409952 LHFPL4Q7Z7J7 247 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 SLC22A16Q86VW1 577 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 CBWD2Q8IUF1 395 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 RNF113BQ8IZP6 322 aaKnown RBP4.48□□□□□ -1.69
LSM5-205ENST00000409952 C7orf57Q8NEG2 295 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 OR4L1Q8NH43 312 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 SUSD6Q92537 303 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 LPAR1Q92633 364 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 PRICKLE1Q96MT3 831 aaPredicted RBP4.48□□□□□ -1.69
LSM5-205ENST00000409952 CSF3RQ99062 836 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 BCL7BQ9BQE9 202 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 CCDC3Q9BQI4 270 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 TRAF4Q9BUZ4 470 aaPredicted RBP4.48□□□□□ -1.69
LSM5-205ENST00000409952 RBM24Q9BX46 236 aaKnown RBP4.48□□□□□ -1.69
LSM5-205ENST00000409952 FAM192AQ9GZU8 254 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 EVA1AQ9H8M9 152 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 CHST11Q9NPF2 352 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 SLC38A7Q9NVC3 462 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 ERVK-18Q9QC07 812 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 MRTO4Q9UKD2 239 aaKnown RBP4.48□□□□□ -1.69
LSM5-205ENST00000409952 PILRAQ9UKJ1 303 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 FZD10Q9ULW2 581 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 STUB1Q9UNE7 303 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 TRAF3IP3Q9Y228 551 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 ETV7Q9Y603 341 aa4.48□□□□□ -1.69
LSM5-205ENST00000409952 A0A0G2JNG1 304 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 ASB14A6NK59 587 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 BECN2A8MW95 431 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 WASH3PC4AMC7 463 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 E9PMD0 336 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 SGK494L7N484 410 aa4.47□□□□□ -1.69
LSM5-205ENST00000409952 ZNHIT1O43257 154 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms