RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 ATP1A1P05023 1023 aaKnown RBP4.04□□□□□ -1.76
CLK1-203ENST00000409769 SRPRAP08240 638 aaKnown RBP4.04□□□□□ -1.76
CLK1-203ENST00000409769 TCF4P15884 667 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 PRLRP16471 622 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 PSMA2P25787 234 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 CTNNA2P26232 953 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 HOXA9P31269 272 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 CTNNA1P35221 906 aaKnown RBP4.04□□□□□ -1.76
CLK1-203ENST00000409769 PCK1P35558 622 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 PSMB10P40306 273 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 MATKP42679 507 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 CTSCP53634 463 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 KRTAP10-12P60413 245 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 ARF3P61204 181 aaPredicted RBP4.04□□□□□ -1.76
CLK1-203ENST00000409769 ISL1P61371 349 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 RPL10AP62906 217 aaKnown RBP4.04□□□□□ -1.76
CLK1-203ENST00000409769 RPL24P83731 157 aaKnown RBP4.04□□□□□ -1.76
CLK1-203ENST00000409769 ARF1P84077 181 aaKnown RBP4.04□□□□□ -1.76
CLK1-203ENST00000409769 SLC25A11Q02978 314 aaKnown RBP4.04□□□□□ -1.76
CLK1-203ENST00000409769 TWF1Q12792 350 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 PIGHQ14442 188 aaPredicted RBP4.04□□□□□ -1.76
CLK1-203ENST00000409769 LRIT3Q3SXY7 679 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 GKAP1Q5VSY0 366 aaPredicted RBP4.04□□□□□ -1.76
CLK1-203ENST00000409769 SYPL2Q5VXT5 272 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 PLPP4Q5VZY2 271 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 DCUN1D2Q6PH85 259 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 CYP4V2Q6ZWL3 525 aaPredicted RBP4.04□□□□□ -1.76
CLK1-203ENST00000409769 STRADAQ7RTN6 431 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 ADGRD2Q7Z7M1 963 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 TMEM150AQ86TG1 271 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 MCEMP1Q8IX19 187 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 SYCE1Q8N0S2 351 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 DEFB106AQ8N104 65 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 SIX6OS1Q8N1H7 587 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 HMGCLL1Q8TB92 370 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 SLC38A5Q8WUX1 472 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 RXFP2Q8WXD0 754 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 KRT35Q92764 455 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 PSMG2Q969U7 264 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 PGAP3Q96FM1 320 aaPredicted RBP4.04□□□□□ -1.76
CLK1-203ENST00000409769 CFAP57Q96MR6 1250 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 ALS2CR12Q96Q35 445 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 NPY6RQ99463 290 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 NAPGQ99747 312 aaPredicted RBP4.04□□□□□ -1.76
CLK1-203ENST00000409769 FBXO44Q9H4M3 255 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 SYNCQ9H7C4 482 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 NMUR1Q9HB89 426 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 POPDC2Q9HBU9 364 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 OSER1Q9NX31 292 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 MTUS1Q9ULD2 1270 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 PACSIN2Q9UNF0 486 aaPredicted RBP4.04□□□□□ -1.76
CLK1-203ENST00000409769 EXO1Q9UQ84 846 aaKnown RBP4.04□□□□□ -1.76
CLK1-203ENST00000409769 JRKLQ9Y4A0 524 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 HYOU1Q9Y4L1 999 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 KIF26AQ9ULI4 1882 aaPredicted RBP4.04□□□□□ -1.76
CLK1-203ENST00000409769 MYOFQ9NZM1 2061 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 LAMA2P24043 3122 aaKnown RBP4.04□□□□□ -1.76
CLK1-203ENST00000409769 CHD9Q3L8U1 2897 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 TMEM8BA6NDV4 472 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 ZNF840PA6NDX5 716 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 OR5K3A6NET4 321 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 TMEM110-MUSTN1A8MSY1 372 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 MIF4GDA9UHW6 222 aaKnown RBP4.03□□□□□ -1.76
CLK1-203ENST00000409769 P2RY10O00398 339 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 PSTPIP1O43586 416 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 SYNGR3O43761 229 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 XPNPEP2O43895 674 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 PDE9AO76083 593 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 TRUB2O95900 331 aaKnown RBP4.03□□□□□ -1.76
CLK1-203ENST00000409769 OAS1P00973 400 aaKnown RBP4.03□□□□□ -1.76
CLK1-203ENST00000409769 IGLV3-27P01718 113 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 IGHV4-39P01824 125 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 CSH1P0DML2 217 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 CSH2P0DML3 217 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 SELLP14151 372 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 PAX1P15863 534 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 PDGFRAP16234 1089 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 EPCAMP16422 314 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 GABRB1P18505 474 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 KCNA5P22460 613 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 MIPP30301 263 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 CASQ1P31415 396 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 SDC4P31431 198 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 AHRP35869 848 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 PPARGP37231 505 aaPredicted RBP4.03□□□□□ -1.76
CLK1-203ENST00000409769 ARCN1P48444 511 aaKnown RBP4.03□□□□□ -1.76
CLK1-203ENST00000409769 MARCKSL1P49006 195 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 SULT1E1P49888 294 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 CAMPP49913 170 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 ARSEP51690 589 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 NAP1L1P55209 391 aaKnown RBP4.03□□□□□ -1.76
CLK1-203ENST00000409769 GEMIN4P57678 1058 aaKnown RBP4.03□□□□□ -1.76
CLK1-203ENST00000409769 YWHAGP61981 247 aaKnown RBP eCLIP4.03□□□□□ -1.76
CLK1-203ENST00000409769 PLIN5Q00G26 463 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 SPOCK1Q08629 439 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 TAF10Q12962 218 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 GAGE2BQ13066 116 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 PLD1Q13393 1074 aa4.03□□□□□ -1.76
CLK1-203ENST00000409769 SIM2Q14190 667 aaPredicted RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms