RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 CSTAP01040 98 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 PORP16435 677 aaPredicted RBP4.78□□□□□ -1.64
HDAC9-204ENST00000406451 FOXK1P85037 733 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 TUBB3Q13509 450 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 ATP1A4Q13733 1029 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 DOC2AQ14183 400 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 PCLAFQ15004 111 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 PRPF38BQ5VTL8 546 aaKnown RBP4.78□□□□□ -1.64
HDAC9-204ENST00000406451 ZNF100Q8IYN0 542 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 CBARPQ8N350 705 aaPredicted RBP4.78□□□□□ -1.64
HDAC9-204ENST00000406451 FITM2Q8N6M3 262 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 CLEC1AQ8NC01 280 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 FAM156AQ8NDB6 213 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 OR4K1Q8NGD4 311 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.78□□□□□ -1.64
HDAC9-204ENST00000406451 MYLIPQ8WY64 445 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 LRCH3Q96II8 777 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 LGR4Q9BXB1 951 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 RPF2Q9H7B2 306 aaKnown RBP4.78□□□□□ -1.64
HDAC9-204ENST00000406451 IL26Q9NPH9 171 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 HPF1Q9NWY4 346 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 HEMK1Q9Y5R4 338 aaPredicted RBP4.78□□□□□ -1.64
HDAC9-204ENST00000406451 SESN1Q9Y6P5 492 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 ICE1Q9Y2F5 2266 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 A0A1W2PP18 115 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 M0QX08 132 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 SOX1O00570 391 aaPredicted RBP4.78□□□□□ -1.64
HDAC9-204ENST00000406451 WBP4O75554 376 aaKnown RBP4.78□□□□□ -1.64
HDAC9-204ENST00000406451 BCAS2O75934 225 aaPredicted RBP4.78□□□□□ -1.64
HDAC9-204ENST00000406451 DRD2P14416 443 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 DNAJA1P31689 397 aaKnown RBP4.78□□□□□ -1.64
HDAC9-204ENST00000406451 DMPKQ09013 629 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 C5orf22Q49AR2 442 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 FAM69BQ5VUD6 431 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 USP30Q70CQ3 517 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 HSD11B1LQ7Z5J1 315 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 EID2Q8N6I1 236 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 ANKFN1Q8N957 763 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 OR4C15Q8NGM1 316 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 BBS10Q8TAM1 723 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 SETD6Q8TBK2 473 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 F2RL3Q96RI0 385 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 IRF2BPLQ9H1B7 796 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 ZNF304Q9HCX3 659 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 ACTR10Q9NZ32 417 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 PISDQ9UG56 409 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 CLEC4AQ9UMR7 237 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 SCN4AP35499 1836 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 ATAD5Q96QE3 1844 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 GFRA2O00451 464 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 ARPC2O15144 300 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 TBX1O43435 398 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 SSNA1O43805 119 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 SHOX2O60902 331 aaPredicted RBP4.78□□□□□ -1.64
HDAC9-204ENST00000406451 HOXD8P13378 290 aaPredicted RBP4.78□□□□□ -1.64
HDAC9-204ENST00000406451 MGAT3Q09327 533 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 SLC14A2Q15849 920 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 NNATQ16517 81 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 CDKN3Q16667 212 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 TMEM225Q6GV28 225 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 NUP43Q8NFH3 380 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 OR52B2Q96RD2 323 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 MAP3K3Q99759 626 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 BOCQ9BWV1 1114 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 LIPT1Q9Y234 373 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 NPPAP01160 153 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 NELFEP18615 380 aaKnown RBP4.78□□□□□ -1.64
HDAC9-204ENST00000406451 RPS3P23396 243 aaKnown RBP eCLIP4.78□□□□□ -1.64
HDAC9-204ENST00000406451 MAP3K8P41279 467 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 WDR4P57081 412 aaKnown RBP4.78□□□□□ -1.64
HDAC9-204ENST00000406451 MRPL49Q13405 166 aaKnown RBP4.78□□□□□ -1.64
HDAC9-204ENST00000406451 NFATC4Q14934 902 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 KIR2DS3Q14952 304 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 IQCCQ4KMZ1 466 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 TMEM214Q6NUQ4 689 aaKnown RBP4.78□□□□□ -1.64
HDAC9-204ENST00000406451 EPGNQ6UW88 154 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 GAREM2Q75VX8 874 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 ZFAND4Q86XD8 727 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 OR5P2Q8WZ92 322 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 DIO2Q92813 273 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 RAB8BQ92930 207 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 CPNE2Q96FN4 548 aaPredicted RBP4.78□□□□□ -1.64
HDAC9-204ENST00000406451 RBP7Q96R05 134 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 OR1F2PQ96R84 312 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 BRD7Q9NPI1 651 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 GRHPRQ9UBQ7 328 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 RIMKLBQ9ULI2 386 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 SSC5DA1L4H1 1573 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 BRWD1Q9NSI6 2320 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 MYOCOSA0A1B0GUC4 107 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 WASH4PA8MWX3 477 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 SDC2P34741 201 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 GGT5P36269 586 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 SMSP52788 366 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 ARG2P78540 354 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 FAM189BP81408 668 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 ABHD18Q0P651 414 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 ADGRE1Q14246 886 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 OR4C11Q6IEV9 310 aa4.78□□□□□ -1.64
HDAC9-204ENST00000406451 TMEM107Q6UX40 140 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms