RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 ELF5Q9UKW6 265 aaPredicted RBP15.55■□□□□ 0.08
COL4A3BP-204ENST00000405807 ANKRD66B4E2M5 251 aa15.55■□□□□ 0.08
COL4A3BP-204ENST00000405807 LOC110117498-PIK3R3F6TDL0 507 aa15.55■□□□□ 0.08
COL4A3BP-204ENST00000405807 PLATP00750 562 aa15.55■□□□□ 0.08
COL4A3BP-204ENST00000405807 C1QBP02746 253 aa15.55■□□□□ 0.08
COL4A3BP-204ENST00000405807 TACR2P21452 398 aa15.55■□□□□ 0.08
COL4A3BP-204ENST00000405807 PTPN6P29350 595 aa15.55■□□□□ 0.08
COL4A3BP-204ENST00000405807 GDF5P43026 501 aa15.55■□□□□ 0.08
COL4A3BP-204ENST00000405807 P2RY4P51582 365 aa15.55■□□□□ 0.08
COL4A3BP-204ENST00000405807 BEX3Q00994 111 aa15.55■□□□□ 0.08
COL4A3BP-204ENST00000405807 CAMK2GQ13555 558 aaPredicted RBP15.55■□□□□ 0.08
COL4A3BP-204ENST00000405807 GRK1Q15835 563 aa15.55■□□□□ 0.08
COL4A3BP-204ENST00000405807 FAM171A1Q5VUB5 890 aa15.55■□□□□ 0.08
COL4A3BP-204ENST00000405807 FAHD1Q6P587 224 aa15.55■□□□□ 0.08
COL4A3BP-204ENST00000405807 TEX261Q6UWH6 196 aa15.55■□□□□ 0.08
COL4A3BP-204ENST00000405807 SLC46A3Q7Z3Q1 461 aa15.55■□□□□ 0.08
COL4A3BP-204ENST00000405807 LINC00052Q96N35 136 aa15.55■□□□□ 0.08
COL4A3BP-204ENST00000405807 SPON2Q9BUD6 331 aa15.55■□□□□ 0.08
COL4A3BP-204ENST00000405807 ACTR10Q9NZ32 417 aa15.55■□□□□ 0.08
COL4A3BP-204ENST00000405807 U3KQ87 197 aa15.55■□□□□ 0.08
COL4A3BP-204ENST00000405807 RFXANKO14593 260 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 BRINP1O60477 761 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 C21orf33P30042 268 aaPredicted RBP15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 HOXC8P31273 242 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 PER3P56645 1201 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 GABREP78334 506 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 CYP27C1Q4G0S4 372 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 PTRHD1Q6GMV3 140 aaKnown RBP15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 ANGPTL8Q6UXH0 198 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 MACC1Q6ZN28 852 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 OR6C4Q8NGE1 309 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 UBASH3BQ8TF42 649 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 HRASLS5Q96KN8 279 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 PLCXD1Q9NUJ7 323 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 GLS2Q9UI32 602 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 PSORS1C1Q9UIG5 152 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 PCDHGC4Q9Y5F7 938 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 RAI2Q9Y5P3 530 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 NLRC5Q86WI3 1866 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 LOC730098B7Z3J9 87 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 CA12O43570 354 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 SEMG1P04279 462 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 RRASP10301 218 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 PRPS2P11908 318 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 HOXB9P17482 250 aaPredicted RBP15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 ZP3P21754 424 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 CTNNB1P35222 781 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 SLC15A1P46059 708 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 RPS5P46782 204 aaKnown RBP15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 VLDLRP98155 873 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 CACNG1Q06432 222 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 SPANXN2Q5MJ10 180 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 MLIPQ5VWP3 458 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 CFAP52Q8N1V2 620 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 SRFBP1Q8NEF9 429 aaKnown RBP15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 PAPOLGQ9BWT3 736 aaKnown RBP15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 AP5M1Q9H0R1 490 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 THUMPD1Q9NXG2 353 aaKnown RBP15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 COPZ2Q9P299 210 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 PCDHB8Q9UN66 801 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 BRCA2P51587 3418 aa15.54■□□□□ 0.08
COL4A3BP-204ENST00000405807 LOC100506127A0A0U1RQW1 187 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 F5H5T6 163 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 DDNO94850 711 aaPredicted RBP15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 IGLV3-27P01718 113 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 CD63P08962 238 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 EPB42P16452 691 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 CR2P20023 1033 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 KDELR2P33947 212 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 CDKN2CP42773 168 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 VMACQ2NL98 169 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 INO80DQ53TQ3 878 aaPredicted RBP15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 NADSYN1Q6IA69 706 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 ZNF551Q7Z340 670 aaPredicted RBP15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 GTF3AQ92664 365 aaKnown RBP15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 FUBP3Q96I24 572 aaKnown RBP eCLIP15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 SLC29A3Q9BZD2 475 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 CIPCQ9C0C6 399 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 RHBGQ9H310 441 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 AFF4Q9UHB7 1163 aaKnown RBP15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 PCDHGA6Q9Y5G7 932 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 LAMA3Q16787 3333 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 E9PQ18 207 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 TSPAN3O60637 253 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 C9P02748 559 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 CTSHP09668 335 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 VAMP1P23763 118 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 PBLDP30039 288 aaPredicted RBP15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 SMAD4Q13485 552 aaKnown RBP15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 ERICH5Q6P6B1 374 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 CERS6Q6ZMG9 384 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 EIF3MQ7L2H7 374 aaKnown RBP15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 VTCN1Q7Z7D3 282 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 DMRTC2Q8IXT2 367 aaPredicted RBP15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 FBXO32Q969P5 355 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 MTFMTQ96DP5 389 aaKnown RBP15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 DCLRE1CQ96SD1 692 aaKnown RBP15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 ZCCHC2Q9C0B9 1178 aaKnown RBP15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 ZNF408Q9H9D4 720 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 RDH8Q9NYR8 311 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms