RNA–Protein interactions for RNA: ENST00000405025.5

HDAC11-206, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-206ENST00000405025 CDK15Q96Q40 435 aa24.61■■□□□ 1.53
HDAC11-206ENST00000405025 MTERF1Q99551 399 aaKnown RBP24.61■■□□□ 1.53
HDAC11-206ENST00000405025 MAPKAP1Q9BPZ7 522 aa24.61■■□□□ 1.53
HDAC11-206ENST00000405025 TBCDQ9BTW9 1192 aa24.61■■□□□ 1.53
HDAC11-206ENST00000405025 NOL11Q9H8H0 719 aaKnown RBP24.61■■□□□ 1.53
HDAC11-206ENST00000405025 PCTPQ9UKL6 214 aa24.61■■□□□ 1.53
HDAC11-206ENST00000405025 HECTD1Q9ULT8 2610 aa24.61■■□□□ 1.53
HDAC11-206ENST00000405025 PTPN13Q12923 2485 aa24.6■■□□□ 1.53
HDAC11-206ENST00000405025 PIK3CGP48736 1102 aa24.6■■□□□ 1.53
HDAC11-206ENST00000405025 HSD17B7P56937 341 aa24.6■■□□□ 1.53
HDAC11-206ENST00000405025 SLC13A2Q13183 592 aa24.6■■□□□ 1.53
HDAC11-206ENST00000405025 CPSF6Q16630 551 aaKnown RBP eCLIP24.6■■□□□ 1.53
HDAC11-206ENST00000405025 TEX35Q5T0J7 233 aa24.6■■□□□ 1.53
HDAC11-206ENST00000405025 TMEM151AQ8N4L1 468 aa24.6■■□□□ 1.53
HDAC11-206ENST00000405025 OR52B6Q8NGF0 335 aa24.6■■□□□ 1.53
HDAC11-206ENST00000405025 CMTM7Q96FZ5 175 aa24.6■■□□□ 1.53
HDAC11-206ENST00000405025 TAAR6Q96RI8 345 aa24.6■■□□□ 1.53
HDAC11-206ENST00000405025 MRPL57Q9BQC6 102 aaKnown RBP24.6■■□□□ 1.53
HDAC11-206ENST00000405025 PNO1Q9NRX1 252 aaKnown RBP24.6■■□□□ 1.53
HDAC11-206ENST00000405025 ANKRD10Q9NXR5 420 aa24.6■■□□□ 1.53
HDAC11-206ENST00000405025 COL12A1Q99715 3063 aa24.6■■□□□ 1.53
HDAC11-206ENST00000405025 MYOCOSA0A1B0GUC4 107 aa24.59■■□□□ 1.53
HDAC11-206ENST00000405025 STX16-NPEPL1H3BU86 382 aa24.59■■□□□ 1.53
HDAC11-206ENST00000405025 STX16O14662 325 aa24.59■■□□□ 1.53
HDAC11-206ENST00000405025 SMIM24O75264 130 aa24.59■■□□□ 1.53
HDAC11-206ENST00000405025 MYO1DO94832 1006 aa24.59■■□□□ 1.53
HDAC11-206ENST00000405025 SCELO95171 688 aa24.59■■□□□ 1.53
HDAC11-206ENST00000405025 HIST1H1TP22492 207 aaPredicted RBP24.59■■□□□ 1.53
HDAC11-206ENST00000405025 SSR2P43308 183 aa24.59■■□□□ 1.53
HDAC11-206ENST00000405025 RPS13P62277 151 aaKnown RBP24.59■■□□□ 1.53
HDAC11-206ENST00000405025 MEP1AQ16819 746 aa24.59■■□□□ 1.53
HDAC11-206ENST00000405025 DEPDC1Q5TB30 811 aa24.59■■□□□ 1.53
HDAC11-206ENST00000405025 RPUSD3Q6P087 351 aaKnown RBP24.59■■□□□ 1.53
HDAC11-206ENST00000405025 METTL2BQ6P1Q9 378 aaKnown RBP24.59■■□□□ 1.53
HDAC11-206ENST00000405025 TIFABQ6ZNK6 161 aa24.59■■□□□ 1.53
HDAC11-206ENST00000405025 CHSY3Q70JA7 882 aa24.59■■□□□ 1.53
HDAC11-206ENST00000405025 RPS27LQ71UM5 84 aaKnown RBP24.59■■□□□ 1.53
HDAC11-206ENST00000405025 ZNF595Q8IYB9 648 aa24.59■■□□□ 1.53
HDAC11-206ENST00000405025 L3MBTL4Q8NA19 623 aa24.59■■□□□ 1.53
HDAC11-206ENST00000405025 SRFBP1Q8NEF9 429 aaKnown RBP24.59■■□□□ 1.53
HDAC11-206ENST00000405025 ROGDIQ9GZN7 287 aa24.59■■□□□ 1.53
HDAC11-206ENST00000405025 MRPL46Q9H2W6 279 aaKnown RBP24.59■■□□□ 1.53
HDAC11-206ENST00000405025 ZBTB26Q9HCK0 441 aa24.59■■□□□ 1.53
HDAC11-206ENST00000405025 LYRM4Q9HD34 91 aa24.59■■□□□ 1.53
HDAC11-206ENST00000405025 AGPAT4Q9NRZ5 378 aa24.59■■□□□ 1.53
HDAC11-206ENST00000405025 TSC22D4Q9Y3Q8 395 aa24.59■■□□□ 1.53
HDAC11-206ENST00000405025 PCDHGA11Q9Y5H2 935 aa24.59■■□□□ 1.53
HDAC11-206ENST00000405025 H0YIV9 168 aa24.58■■□□□ 1.53
HDAC11-206ENST00000405025 CLDN4O14493 209 aa24.58■■□□□ 1.53
HDAC11-206ENST00000405025 UGDHO60701 494 aa24.58■■□□□ 1.53
HDAC11-206ENST00000405025 SEMA7AO75326 666 aa24.58■■□□□ 1.53
HDAC11-206ENST00000405025 PIK3CBP42338 1070 aa24.58■■□□□ 1.53
HDAC11-206ENST00000405025 NEK2P51955 445 aa24.58■■□□□ 1.53
HDAC11-206ENST00000405025 TUBA3CQ13748 450 aa24.58■■□□□ 1.53
HDAC11-206ENST00000405025 ZRSR2Q15696 482 aaKnown RBP24.58■■□□□ 1.53
HDAC11-206ENST00000405025 FAM219BQ5XKK7 198 aa24.58■■□□□ 1.53
HDAC11-206ENST00000405025 TUBA3EQ6PEY2 450 aa24.58■■□□□ 1.53
HDAC11-206ENST00000405025 SLC5A8Q8N695 610 aa24.58■■□□□ 1.53
HDAC11-206ENST00000405025 FAR1Q8WVX9 515 aa24.58■■□□□ 1.53
HDAC11-206ENST00000405025 CDCP1Q9H5V8 836 aa24.58■■□□□ 1.53
HDAC11-206ENST00000405025 ADGRE2Q9UHX3 823 aa24.58■■□□□ 1.53
HDAC11-206ENST00000405025 TMCO1Q9UM00 188 aa24.58■■□□□ 1.53
HDAC11-206ENST00000405025 MRPS33Q9Y291 106 aaKnown RBP24.58■■□□□ 1.53
HDAC11-206ENST00000405025 ANKUB1A6NFN9 424 aa24.57■■□□□ 1.52
HDAC11-206ENST00000405025 A8MT66 165 aa24.57■■□□□ 1.52
HDAC11-206ENST00000405025 PLPP1O14494 284 aa24.57■■□□□ 1.52
HDAC11-206ENST00000405025 PRAMEF2O60811 474 aa24.57■■□□□ 1.52
HDAC11-206ENST00000405025 ETHE1O95571 254 aa24.57■■□□□ 1.52
HDAC11-206ENST00000405025 RPS17P08708 135 aaKnown RBP24.57■■□□□ 1.52
HDAC11-206ENST00000405025 TAS2R50P59544 299 aa24.57■■□□□ 1.52
HDAC11-206ENST00000405025 SRSF11Q05519 484 aaKnown RBP24.57■■□□□ 1.52
HDAC11-206ENST00000405025 TRAF3Q13114 568 aa24.57■■□□□ 1.52
HDAC11-206ENST00000405025 AP5B1Q2VPB7 878 aa24.57■■□□□ 1.52
HDAC11-206ENST00000405025 FHL5Q5TD97 284 aa24.57■■□□□ 1.52
HDAC11-206ENST00000405025 LGSNQ5TDP6 509 aa24.57■■□□□ 1.52
HDAC11-206ENST00000405025 OR4C11Q6IEV9 310 aa24.57■■□□□ 1.52
HDAC11-206ENST00000405025 FAM180AQ6UWF9 173 aa24.57■■□□□ 1.52
HDAC11-206ENST00000405025 APCDD1LQ8NCL9 501 aa24.57■■□□□ 1.52
HDAC11-206ENST00000405025 PRR7Q8TB68 274 aa24.57■■□□□ 1.52
HDAC11-206ENST00000405025 WDR20Q8TBZ3 569 aa24.57■■□□□ 1.52
HDAC11-206ENST00000405025 MTBPQ96DY7 904 aa24.57■■□□□ 1.52
HDAC11-206ENST00000405025 SIGLEC12Q96PQ1 595 aa24.57■■□□□ 1.52
HDAC11-206ENST00000405025 TMEM216Q9P0N5 145 aa24.57■■□□□ 1.52
HDAC11-206ENST00000405025 FBXW2Q9UKT8 454 aa24.57■■□□□ 1.52
HDAC11-206ENST00000405025 HIVEP3Q5T1R4 2406 aa24.56■■□□□ 1.52
HDAC11-206ENST00000405025 A0A1B0GTL3 188 aa24.56■■□□□ 1.52
HDAC11-206ENST00000405025 GABRR3A8MPY1 467 aa24.56■■□□□ 1.52
HDAC11-206ENST00000405025 CLDN9O95484 217 aa24.56■■□□□ 1.52
HDAC11-206ENST00000405025 CD96P40200 585 aa24.56■■□□□ 1.52
HDAC11-206ENST00000405025 ARL1P40616 181 aaPredicted RBP24.56■■□□□ 1.52
HDAC11-206ENST00000405025 RAP1GDS1P52306 607 aa24.56■■□□□ 1.52
HDAC11-206ENST00000405025 MDS2Q8NDY4 140 aa24.56■■□□□ 1.52
HDAC11-206ENST00000405025 B3GNT7Q8NFL0 401 aa24.56■■□□□ 1.52
HDAC11-206ENST00000405025 MZB1Q8WU39 189 aa24.56■■□□□ 1.52
HDAC11-206ENST00000405025 RGMAQ96B86 450 aa24.56■■□□□ 1.52
HDAC11-206ENST00000405025 ZNF717Q9BY31 904 aaPredicted RBP24.56■■□□□ 1.52
HDAC11-206ENST00000405025 HES7Q9BYE0 225 aa24.56■■□□□ 1.52
HDAC11-206ENST00000405025 SEMA4BQ9NPR2 832 aaPredicted RBP24.56■■□□□ 1.52
HDAC11-206ENST00000405025 PSMC3IPQ9P2W1 217 aaPredicted RBP24.56■■□□□ 1.52
HDAC11-206ENST00000405025 ZNF223Q9UK11 482 aaPredicted RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms