RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 KCNC2Q96PR1 638 aa12.45□□□□□ -0.42
SDF4-203ENST00000403997 DEFB126Q9BYW3 111 aa12.45□□□□□ -0.42
SDF4-203ENST00000403997 ROGDIQ9GZN7 287 aa12.45□□□□□ -0.42
SDF4-203ENST00000403997 CPSF2Q9P2I0 782 aaKnown RBP12.45□□□□□ -0.42
SDF4-203ENST00000403997 DAPP1Q9UN19 280 aa12.45□□□□□ -0.42
SDF4-203ENST00000403997 DIDO1Q9BTC0 2240 aaKnown RBP12.44□□□□□ -0.42
SDF4-203ENST00000403997 TRBV11-1A0A0K0K1C0 115 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 LRRC14BA6NHZ5 514 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 KIF2AO00139 706 aaPredicted RBP12.44□□□□□ -0.42
SDF4-203ENST00000403997 CYR61O00622 381 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 LRRTM2O43300 516 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 IFNA16P05015 189 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 SP1P08047 785 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 ATP5A1P25705 553 aaKnown RBP12.44□□□□□ -0.42
SDF4-203ENST00000403997 MST1P26927 711 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 TPP2P29144 1249 aaPredicted RBP12.44□□□□□ -0.42
SDF4-203ENST00000403997 PPP2R1BP30154 601 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 SERPINB1P30740 379 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 SERPINB9P50453 376 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 CLCN2P51788 898 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 TDGF1P3P51864 188 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 ALDH18A1P54886 795 aaKnown RBP12.44□□□□□ -0.42
SDF4-203ENST00000403997 MLF1P58340 268 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 PMP22Q01453 160 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 PCDH1Q08174 1060 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 DDX39BQ13838 428 aaKnown RBP12.44□□□□□ -0.42
SDF4-203ENST00000403997 E2F2Q14209 437 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 SETDB1Q15047 1291 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 AP5B1Q2VPB7 878 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 GRHL2Q6ISB3 625 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 TAOK1Q7L7X3 1001 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 LAS2Q8IYD9 372 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 ACOT4Q8N9L9 421 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 B3GNT7Q8NFL0 401 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 KIF18AQ8NI77 898 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 THAP3Q8WTV1 239 aaPredicted RBP12.44□□□□□ -0.42
SDF4-203ENST00000403997 GPR78Q96P69 363 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 CSF3RQ99062 836 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 TBCDQ9BTW9 1192 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 MS4A8Q9BY19 250 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 FUT8Q9BYC5 575 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 HES7Q9BYE0 225 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 LYRM4Q9HD34 91 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 KCMF1Q9P0J7 381 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 LRFN1Q9P244 771 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 SEC14L3Q9UDX4 400 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 ADGRE2Q9UHX3 823 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 FBXW2Q9UKT8 454 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 PCDHGB6Q9Y5F9 930 aa12.44□□□□□ -0.42
SDF4-203ENST00000403997 MYOCOSA0A1B0GUC4 107 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 POC1B-GALNT4F8VUJ3 575 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 TGFBR3LH3BV60 316 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 SAP18O00422 153 aaKnown RBP12.43□□□□□ -0.42
SDF4-203ENST00000403997 RTCAO00442 366 aaKnown RBP12.43□□□□□ -0.42
SDF4-203ENST00000403997 FCHO1O14526 889 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 CTNSO60931 367 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 UNC5CO95185 931 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 STSP08842 583 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 EEF1DP29692 281 aaKnown RBP12.43□□□□□ -0.42
SDF4-203ENST00000403997 RAP1GDS1P52306 607 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 PER3P56645 1201 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 STX4Q12846 297 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 GTF2H2Q13888 395 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 NAA30Q147X3 362 aaPredicted RBP12.43□□□□□ -0.42
SDF4-203ENST00000403997 PCBP2Q15366 365 aaKnown RBP eCLIP12.43□□□□□ -0.425e-11■■■■□ 24.9
SDF4-203ENST00000403997 TERF2Q15554 542 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 MAPKAPK3Q16644 382 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 DEPDC1Q5TB30 811 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 ZNF468Q5VIY5 522 aaPredicted RBP12.43□□□□□ -0.42
SDF4-203ENST00000403997 KHDRBS2Q5VWX1 349 aaKnown RBP12.43□□□□□ -0.42
SDF4-203ENST00000403997 LIPJQ5W064 366 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 SLC25A25Q6KCM7 469 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 GTF2H2CQ6P1K8 395 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 ZNF793Q6ZN11 406 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 GALNTL5Q7Z4T8 443 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 PLD6Q8N2A8 252 aaKnown RBP12.43□□□□□ -0.42
SDF4-203ENST00000403997 TMEM178AQ8NBL3 297 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 APCDD1LQ8NCL9 501 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 HUS1BQ8NHY5 278 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 SCMH1Q96GD3 660 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 SCYL1Q96KG9 808 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 PAFAH2Q99487 392 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 MAPKAP1Q9BPZ7 522 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 CCDC77Q9BR77 488 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 ALOXE3Q9BYJ1 711 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 OR51B5Q9H339 312 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 ACTR8Q9H981 624 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 ADAP2Q9NPF8 381 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 ZNF358Q9NW07 568 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 PCDHGA11Q9Y5H2 935 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 TNPO3Q9Y5L0 923 aaKnown RBP12.43□□□□□ -0.42
SDF4-203ENST00000403997 CLCA3PQ9Y6N3 262 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 SPACA6W5XKT8 324 aa12.43□□□□□ -0.42
SDF4-203ENST00000403997 A0A087WUV0 522 aaPredicted RBP12.42□□□□□ -0.42
SDF4-203ENST00000403997 A0A1B0GUH1 482 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 SYNDIG1LA6NDD5 238 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 CDK2AP1O14519 115 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 KLK8O60259 260 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 KRT38O76015 456 aa12.42□□□□□ -0.42
SDF4-203ENST00000403997 NEURL1O76050 574 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms