RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 PARVGQ9HBI0 331 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 EXOC1Q9NV70 894 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 PANK4Q9NVE7 773 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 SPHK1Q9NYA1 384 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 MAN1B1Q9UKM7 699 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 UBE4BO95155 1302 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 NRCAMQ92823 1304 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 SYNRGQ9UMZ2 1314 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 A0A087WWV3 80 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 IGHV4-61A0A0C4DH41 118 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 A0A1W2PRQ8 180 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 CASTOR2A6NHX0 329 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 ANXA2P2A6NMY6 339 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 H0YCG3 227 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 CCDC188H7C350 402 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 IGHV4-59P01825 116 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 AMBPP02760 352 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 SP1P08047 785 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 IGHV4-31P0DP07 118 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 IRF2P14316 349 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 EPCAMP16422 314 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 CASP1P29466 404 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 CCND3P30281 292 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 CDC25CP30307 473 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 HOXC8P31273 242 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 ARL2P36404 184 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 ROR1Q01973 937 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 MXD4Q14582 209 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 EMC2Q15006 297 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 HERC3Q15034 1050 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 NPTX1Q15818 432 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 KIAA1644Q3SXP7 199 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 LACTB2Q53H82 288 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 HERC4Q5GLZ8 1057 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 C6orf136Q5SQH8 315 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 FAM53AQ6NSI3 398 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 STXBP4Q6ZWJ1 553 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 KRT77Q7Z794 578 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 ABI3BPQ7Z7G0 1075 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 KLHDC8BQ8IXV7 354 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 DAW1Q8N136 415 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 OR10Q1Q8NGQ4 319 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 OR52N5Q8NH56 324 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 SETD6Q8TBK2 473 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 TCP11Q8WWU5 503 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 NSMAFQ92636 917 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 PROX1Q92786 737 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 DHTKD1Q96HY7 919 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 MTG1Q9BT17 334 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 GTPBP2Q9BX10 602 aaKnown RBP4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 OR2B2Q9GZK3 357 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 FN3KQ9H479 309 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 TSPY26PQ9H489 355 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 TLE6Q9H808 572 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 XAB2Q9HCS7 855 aaKnown RBP4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 XPNPEP1Q9NQW7 623 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 FGF21Q9NSA1 209 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 FAM207AQ9NSI2 230 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 INTS9Q9NV88 658 aaKnown RBP4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 P4HTMQ9NXG6 502 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 C2CD2Q9Y426 696 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 RALGAPA2Q2PPJ7 1873 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 PHLPP2Q6ZVD8 1323 aa4.45□□□□□ -1.7
HMGB3P19-201ENST00000403971 BRCA2P51587 3418 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 TANC1Q9C0D5 1861 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 TRAV34A0A0B4J273 112 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 BICDL2A1A5D9 508 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 MBLAC1A4D2B0 266 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 TMEM150BA6NC51 233 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 RSPH10B2B2RC85 870 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 BLOC1S5-TXNDC5H3BN57 136 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 PSMA7O14818 248 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 ARPC2O15144 300 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 ATP6AP2O75787 350 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 NADKO95544 446 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 PGK1P00558 417 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 GBAP04062 536 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 ASGR1P07306 291 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 RSPH10BP0C881 870 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 PATE4P0C8F1 98 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 ZNF286BP0CG31 522 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 PRSS56P0CW18 603 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 DARSP14868 501 aaKnown RBP4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 ACAT1P24752 427 aaKnown RBP4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 CCNE1P24864 410 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 ITGA3P26006 1051 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 TMOD1P28289 359 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 TLX1P31314 330 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 NAMPTP43490 491 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 RPL21P46778 160 aaKnown RBP4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 CAPZA1P52907 286 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 SNRPFP62306 86 aaKnown RBP4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 DLK1P80370 383 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 GTF2BQ00403 316 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 BEX3Q00994 111 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 LRRC63Q05C16 580 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 CTU2Q2VPK5 515 aaKnown RBP4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 CENPPQ6IPU0 288 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 C15orf39Q6ZRI6 1047 aa4.44□□□□□ -1.7
HMGB3P19-201ENST00000403971 BHLHA9Q7RTU4 235 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms