RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ALPPL2P10696 532 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 KRT3P12035 628 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 PRKACGP22612 351 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 ANOS1P23352 680 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 GIFP27352 417 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 PDHA2P29803 388 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 ID1P41134 155 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 LUMP51884 338 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 IRX4P78413 519 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 DHODHQ02127 395 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 PPP1R8Q12972 351 aaKnown RBP3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 KRT81Q14533 505 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 STX1AQ16623 288 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 PARP10Q53GL7 1025 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 DCAF12Q5T6F0 453 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 SNRNP48Q6IEG0 339 aaKnown RBP3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 OR6B2Q6IFH4 312 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 CAPN13Q6MZZ7 669 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 GET4Q7L5D6 327 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 CACUL1Q86Y37 369 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 SLC22A15Q8IZD6 547 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 LSMEM2Q8N112 164 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 AQP11Q8NBQ7 271 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 ZNF248Q8NDW4 579 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 OR9Q2Q8NGE9 314 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 KIAA1524Q8TCG1 905 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 SLC13A3Q8WWT9 602 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 GLYATL1Q969I3 302 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 C16orf58Q96GQ5 468 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 ART5Q96L15 291 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 AGPAT1Q99943 283 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 JPH2Q9BR39 696 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 SPXQ9BT56 116 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 PAPOLGQ9BWT3 736 aaKnown RBP3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 TEX13AQ9BXU3 409 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 DDX28Q9NUL7 540 aaKnown RBP3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 SPASTQ9UBP0 616 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 COPS7AQ9UBW8 275 aa3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 TCF20Q9UGU0 1960 aaKnown RBP3.32□□□□□ -1.88
HMGB1P17-201ENST00000403495 SPAG9O60271 1321 aaKnown RBP3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 LINC01565O15544 149 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 CSO75390 466 aaKnown RBP3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 SEC22BO75396 215 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 ZFAND5O76080 213 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 ANGPTL1O95841 491 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 ANPEPP15144 967 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 HLA-FP30511 346 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 AKT2P31751 481 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 SFNP31947 248 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 HSPA1LP34931 641 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 TSFMP43897 325 aaKnown RBP3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 CRIP2P52943 208 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 GEMP55040 296 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 NLRP11P59045 1033 aaKnown RBP3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 PLPP4Q5VZY2 271 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 NEPROQ6NW34 567 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 NLRP14Q86W24 1093 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 BATF2Q8N1L9 274 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 ELMOD1Q8N336 334 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 SIDT2Q8NBJ9 832 aaKnown RBP3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 OR4D10Q8NGI6 311 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 ESAMQ96AP7 390 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 ATXN7L3BQ96GX2 97 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 CDHR1Q96JP9 859 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 LURAP1Q96LR2 239 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 ZNF300Q96RE9 604 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 NAP1L3Q99457 506 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 SSX3Q99909 188 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 SYT15Q9BQS2 421 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 CCM2Q9BSQ5 444 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 FUNDC2Q9BWH2 189 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 NUSAP1Q9BXS6 441 aaKnown RBP3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 HOXD1Q9GZZ0 328 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 WWP1Q9H0M0 922 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 DDX47Q9H0S4 455 aaKnown RBP3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 PLEKHA3Q9HB20 300 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 S100A14Q9HCY8 104 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 IL1RAPQ9NPH3 570 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 C2orf42Q9NWW7 574 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 NLGN3Q9NZ94 848 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 FAM153AQ9UHL3 310 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 LNPEPQ9UIQ6 1025 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 MRTO4Q9UKD2 239 aaKnown RBP3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 ERVK-19Q9WJR5 959 aa3.31□□□□□ -1.88
HMGB1P17-201ENST00000403495 A0A0U1RRA0 63 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 TMEM89A2RUT3 159 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 SLC9B1P1A6NJY1 282 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 PRR23D1E9PI22 279 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 ZNF749O43361 778 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 LRP3O75074 770 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 PTBP3O95758 552 aaKnown RBP3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 TGFAP01135 160 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 GSTA2P09210 222 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 PRR23D2P0DMB1 279 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 ETS1P14921 441 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 AOC1P19801 751 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 RPA1P27694 616 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 PRDX6P30041 224 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 GPR183P32249 361 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 NSFP46459 744 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms