RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 ANGPTL3Q9Y5C1 460 aa13.92□□□□□ -0.18
SMIM11A-203ENST00000399299 CLDN16Q9Y5I7 305 aa13.92□□□□□ -0.18
SMIM11A-203ENST00000399299 CENPEQ02224 2701 aa13.92□□□□□ -0.18
SMIM11A-203ENST00000399299 WIPF3A6NGB9 483 aa13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 GABRR3A8MPY1 467 aa13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 RASAL1O95294 804 aa13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 CRYABP02511 175 aaKnown RBP13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 ABHD2P08910 425 aa13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 RBP1P09455 135 aa13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 PCNAP12004 261 aa13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 COL6A2P12110 1019 aa13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 HNRNPFP52597 415 aaKnown RBP13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 ARFIP1P53367 373 aa13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 TSNAXIP1Q2TAA8 658 aa13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 ZNF766Q5HY98 468 aa13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 ZNF793Q6ZN11 406 aa13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 UBE3DQ7Z6J8 389 aa13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 RPS19BP1Q86WX3 136 aaKnown RBP13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 PLD6Q8N2A8 252 aaKnown RBP13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 KIF2BQ8N4N8 673 aa13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 HORMAD2Q8N7B1 307 aa13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 FAM47BQ8NA70 645 aa13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 APCDD1LQ8NCL9 501 aa13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 TMEM52Q8NDY8 209 aa13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 B3GNT7Q8NFL0 401 aa13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 CMTM7Q96FZ5 175 aa13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 ADAP2Q9NPF8 381 aa13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 KCMF1Q9P0J7 381 aa13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 ERRFI1Q9UJM3 462 aaPredicted RBP13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 TMCO1Q9UM00 188 aa13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 PCDHGA11Q9Y5H2 935 aa13.91□□□□□ -0.18
SMIM11A-203ENST00000399299 H0YIV9 168 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 TGFBR3LH3BV60 316 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 MAN1A2O60476 641 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 CTNSO60931 367 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 LDLRP01130 860 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 HIST1H1TP22492 207 aaPredicted RBP13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 ATP5A1P25705 553 aaKnown RBP13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 CD96P40200 585 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 SLC13A2Q13183 592 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 GTF2H2Q13888 395 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 OR1C1Q15619 314 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 DEPDC1Q5TB30 811 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 KHDRBS2Q5VWX1 349 aaKnown RBP13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 GTF2H2CQ6P1K8 395 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 IFT20Q8IY31 132 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 ACOT4Q8N9L9 421 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 C7orf57Q8NEG2 295 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 DCAKDQ8WVC6 231 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 REPS1Q96D71 796 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 SCMH1Q96GD3 660 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 C5orf34Q96MH7 638 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 SIGLEC12Q96PQ1 595 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 CSF3RQ99062 836 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 CENPKQ9BS16 269 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 DEFB126Q9BYW3 111 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 CDCP1Q9H5V8 836 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 TRIM45Q9H8W5 580 aaPredicted RBP13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 ACTR8Q9H981 624 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 DMRT3Q9NQL9 472 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 ZNF358Q9NW07 568 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 CPSF2Q9P2I0 782 aaKnown RBP13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 NFU1Q9UMS0 254 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 SPACA6W5XKT8 324 aa13.9□□□□□ -0.18
SMIM11A-203ENST00000399299 LRRC14BA6NHZ5 514 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 A8MUA0 341 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 POC1B-GALNT4F8VUJ3 575 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 STX16-NPEPL1H3BU86 382 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 STX16O14662 325 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 NEURL1O76050 574 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 MYO1DO94832 1006 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 TGFB1P01137 390 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 SNRPAP09012 282 aaKnown RBP13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 RNF224P0DH78 156 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 CD46P15529 392 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 TRHRP34981 398 aaPredicted RBP13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 CLCN2P51788 898 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 MLF1P58340 268 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 PHEXP78562 749 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 ELAVL1Q15717 326 aaKnown RBP13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 AP5B1Q2VPB7 878 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 C4orf17Q53FE4 359 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 TRMT10CQ7L0Y3 403 aaKnown RBP13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 GOLGA7Q7Z5G4 137 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 CNPY4Q8N129 248 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 PTGR2Q8N8N7 351 aaPredicted RBP13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 L3MBTL4Q8NA19 623 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 TMEM178AQ8NBL3 297 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 HUS1BQ8NHY5 278 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 TRIM44Q96DX7 344 aaPredicted RBP13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 VMP1Q96GC9 406 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 OR51B5Q9H339 312 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 IPPKQ9H8X2 491 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 PNO1Q9NRX1 252 aaKnown RBP13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 PSD3Q9NYI0 1048 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 XPR1Q9UBH6 696 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 PPT2Q9UMR5 302 aa13.89□□□□□ -0.19
SMIM11A-203ENST00000399299 DIDO1Q9BTC0 2240 aaKnown RBP13.88□□□□□ -0.19
SMIM11A-203ENST00000399299 TRBV11-1A0A0K0K1C0 115 aa13.88□□□□□ -0.19
SMIM11A-203ENST00000399299 EXOC1LA0A1B0GW35 172 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms