RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 CLK4Q9HAZ1 481 aaKnown RBP11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 MKKSQ9NPJ1 570 aaPredicted RBP11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SIRT5Q9NXA8 310 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 FAM53CQ9NYF3 392 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ZNF282Q9UDV7 671 aaPredicted RBP11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 MARCOQ9UEW3 520 aaPredicted RBP11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 TCFL5Q9UL49 500 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 DAPP1Q9UN19 280 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CLDN16Q9Y5I7 305 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 LAMA5O15230 3695 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ATP6AP2A0A1C7CYW4 349 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 TGFBR3LH3BV60 316 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 B3GALT2O43825 422 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PRKRAO75569 313 aaKnown RBP11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ATP6AP2O75787 350 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 RECKO95980 971 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 KLK1P06870 262 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PIM1P11309 404 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 RNH1P13489 461 aaKnown RBP11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 HK2P52789 917 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 RAB38P57729 211 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 GUCY1A3Q02108 690 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 TGM3Q08188 693 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 SLAMF1Q13291 335 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PDCD2Q16342 344 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 AP5B1Q2VPB7 878 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 NIPAL1Q6NVV3 410 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 GALNT18Q6P9A2 607 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 NUDT13Q86X67 352 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 DDIASQ8IXT1 998 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ARFGAP2Q8N6H7 521 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 FAM47BQ8NA70 645 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 OR2Y1Q8NGV0 311 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ADAMTS17Q8TE56 1095 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 DYDC1Q8WWB3 177 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 STARD8Q92502 1023 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 KIAA1143Q96AT1 154 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 TBC1D20Q96BZ9 403 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 C19orf60Q96EN9 201 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 SLC45A3Q96JT2 553 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 OR1F2PQ96R84 312 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 CCNL2Q96S94 520 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 CENPKQ9BS16 269 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 GPR87Q9BY21 358 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ROGDIQ9GZN7 287 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 VN1R1Q9GZP7 353 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 LYRM4Q9HD34 91 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PRM3Q9NNZ6 103 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 C14orf105Q9NVL8 296 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 TEX10Q9NXF1 929 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ADAM29Q9UKF5 820 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ZMIZ1Q9ULJ6 1067 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 DLGAP4Q9Y2H0 992 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PTRH2Q9Y3E5 179 aaKnown RBP11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ATG4BQ9Y4P1 393 aa11.7□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PTPRQQ9UMZ3 2332 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 USP24Q9UPU5 2620 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 A0A088AWK7 358 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 A0A1W2PR48 441 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 WASHC1A8K0Z3 465 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 SLC28A1O00337 649 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 SDHDO14521 159 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 CREG1O75629 220 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 CDC123O75794 336 aaPredicted RBP11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 CHEK2O96017 543 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 FAM58BPP0C7Q3 252 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PRR35P0CG20 571 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 KITP10721 976 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ZNF10P21506 573 aaPredicted RBP11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 TIA1P31483 386 aaKnown RBP eCLIP11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 RPS15P62841 145 aaKnown RBP11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 SKP1P63208 163 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 RHAGQ02094 409 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 NR6A1Q15406 480 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 IMPG1Q17R60 797 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 RFTN2Q52LD8 501 aaPredicted RBP11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 SPIN4Q56A73 249 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 C18orf63Q68DL7 685 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 FAM47EQ6ZV65 393 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 WDR75Q8IWA0 830 aaKnown RBP11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 SCUBE1Q8IWY4 988 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 MMP21Q8N119 569 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 AMER2Q8N7J2 671 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 MIEF2Q96C03 454 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PPP1R36Q96LQ0 422 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 YIPF2Q9BWQ6 316 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 EBPLQ9BY08 206 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 NUF2Q9BZD4 464 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 FAM117AQ9C073 453 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 CCDC134Q9H6E4 229 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 LRTM1Q9HBL6 345 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 GPN3Q9UHW5 284 aaPredicted RBP11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 MCM8Q9UJA3 840 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 KCND3Q9UK17 655 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 NXT1Q9UKK6 140 aaKnown RBP11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 FBXW2Q9UKT8 454 aa11.69□□□□□ -0.54
HLA-DQB1-203ENST00000399082 IGKV3D-11A0A0A0MRZ8 115 aa11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 SRRM3A6NNA2 597 aaPredicted RBP11.68□□□□□ -0.54
HLA-DQB1-203ENST00000399082 IDSB3KWA1 339 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms