RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 MTTPP55157 894 aa16.26■□□□□ 0.19
SNRPA1-202ENST00000394082 POU4F1Q01851 419 aa16.26■□□□□ 0.19
SNRPA1-202ENST00000394082 TLE4Q04727 773 aa16.26■□□□□ 0.19
SNRPA1-202ENST00000394082 HP1BP3Q5SSJ5 553 aaPredicted RBP16.26■□□□□ 0.19
SNRPA1-202ENST00000394082 ABHD17CQ6PCB6 329 aa16.26■□□□□ 0.19
SNRPA1-202ENST00000394082 MEX3BQ6ZN04 569 aaKnown RBP16.26■□□□□ 0.19
SNRPA1-202ENST00000394082 MARVELD2Q8N4S9 558 aa16.26■□□□□ 0.19
SNRPA1-202ENST00000394082 RND1Q92730 232 aa16.26■□□□□ 0.19
SNRPA1-202ENST00000394082 KIAA1191Q96A73 305 aa16.26■□□□□ 0.19
SNRPA1-202ENST00000394082 RYDENQ9NUL5 291 aaKnown RBP16.26■□□□□ 0.19
SNRPA1-202ENST00000394082 HPF1Q9NWY4 346 aa16.26■□□□□ 0.19
SNRPA1-202ENST00000394082 CLCA3PQ9Y6N3 262 aa16.26■□□□□ 0.19
SNRPA1-202ENST00000394082 OR2J2O76002 312 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 SAT1P21673 171 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 GDF5P43026 501 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 HNRNPFP52597 415 aaKnown RBP16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 LIM2P55344 173 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 KRTAP10-9P60411 292 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 DR1Q01658 176 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 TFF3Q07654 80 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 TGM3Q08188 693 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 E2F2Q14209 437 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 NDUFAF5Q5TEU4 345 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 HSDL2Q6YN16 418 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 ACAD11Q709F0 780 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 GOLM1Q8NBJ4 401 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 TMEM52Q8NDY8 209 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 SRFBP1Q8NEF9 429 aaKnown RBP16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 OR52N2Q8NGI0 321 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 OR14A16Q8NHC5 309 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 ASB15Q8WXK1 588 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 PWWP2AQ96N64 755 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 EFCAB11Q9BUY7 163 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 ROGDIQ9GZN7 287 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 SLC24A3Q9HC58 644 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 LYRM4Q9HD34 91 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 DEPPQ9NTK1 212 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 KCMF1Q9P0J7 381 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 ERVK-11Q9UQG0 969 aa16.25■□□□□ 0.19
SNRPA1-202ENST00000394082 C2CD3Q4AC94 2353 aa16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 ACOT7O00154 380 aa16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 PRKNO60260 465 aaPredicted RBP16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 CDC40O60508 579 aaKnown RBP eCLIP16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 GLSO94925 669 aaPredicted RBP16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 IGHG3P01860 377 aa16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 PPP2R1BP30154 601 aa16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 RFC3P40938 356 aa16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 KCNC1P48547 511 aa16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 GPR85P60893 370 aa16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 LAPTM5Q13571 262 aa16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 SERTAD2Q14140 314 aa16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 ZNF460Q14592 562 aa16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 XKR6Q5GH73 641 aa16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 EMC4Q5J8M3 183 aa16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 VN1R5Q7Z5H4 357 aa16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 CDH24Q86UP0 819 aa16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 SLC22A16Q86VW1 577 aa16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 FBXO36Q8NEA4 188 aa16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 OR2M7Q8NG81 312 aa16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 PTCD3Q96EY7 689 aaKnown RBP16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 SGCZQ96LD1 299 aa16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 KCNC2Q96PR1 638 aa16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 RASL10BQ96S79 203 aa16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 PRDM7Q9NQW5 492 aa16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 DNAJC11Q9NVH1 559 aa16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 ZNF490Q9ULM2 529 aaPredicted RBP16.24■□□□□ 0.19
SNRPA1-202ENST00000394082 A0A1B0GVC2 190 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 CLGNO14967 610 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 TAPBPO15533 448 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 TOXO94900 526 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 CNR1P21554 472 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 MSX1P28360 303 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 CASP2P42575 452 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 PLA2G16P53816 162 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 SLC12A2P55011 1212 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 ATP6V0D1P61421 351 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 PPIAP62937 165 aaKnown RBP16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 PDIA2Q13087 525 aaKnown RBP16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 BMPR2Q13873 1038 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 TBCCQ15814 346 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 HYAL4Q2M3T9 481 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 PAGE2BQ5JRK9 111 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 SULT1C3Q6IMI6 304 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 GK5Q6ZS86 529 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 CEP128Q6ZU80 1094 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 CYS1Q717R9 158 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 FAM47BQ8NA70 645 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 OR5L2Q8NGL0 311 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 PTPMT1Q8WUK0 201 aaPredicted RBP16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 CCT6BQ92526 530 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 TSPAN17Q96FV3 270 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 TMEM79Q9BSE2 394 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 COPS7BQ9H9Q2 264 aaPredicted RBP16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 KCNJ16Q9NPI9 418 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 RNF6Q9Y252 685 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 HCFC1P51610 2035 aa16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 PHF3Q92576 2039 aaKnown RBP16.23■□□□□ 0.19
SNRPA1-202ENST00000394082 A0A0G2JN53 185 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 CCDC188H7C350 402 aa16.22■□□□□ 0.19
SNRPA1-202ENST00000394082 BCKDKO14874 412 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms