RNA–Protein interactions for RNA: ENST00000393540.7

CCDC110-202, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC110, Length 2,722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-202ENST00000393540 TRIM73Q86UV7 250 aa3.59□□□□□ -1.83
CCDC110-202ENST00000393540 COMTD1Q86VU5 262 aa3.59□□□□□ -1.83
CCDC110-202ENST00000393540 FAM9CQ8IZT9 166 aa3.59□□□□□ -1.83
CCDC110-202ENST00000393540 FLCNQ8NFG4 579 aa3.59□□□□□ -1.83
CCDC110-202ENST00000393540 PJA1Q8NG27 643 aa3.59□□□□□ -1.83
CCDC110-202ENST00000393540 OR4A15Q8NGL6 344 aa3.59□□□□□ -1.83
CCDC110-202ENST00000393540 OR5AK3PQ8NH89 298 aa3.59□□□□□ -1.83
CCDC110-202ENST00000393540 GPBAR1Q8TDU6 330 aa3.59□□□□□ -1.83
CCDC110-202ENST00000393540 APOBEC4Q8WW27 367 aaKnown RBP3.59□□□□□ -1.83
CCDC110-202ENST00000393540 KLHL6Q8WZ60 621 aa3.59□□□□□ -1.83
CCDC110-202ENST00000393540 PPWD1Q96BP3 646 aaKnown RBP3.59□□□□□ -1.83
CCDC110-202ENST00000393540 MS4A6EQ96DS6 147 aa3.59□□□□□ -1.83
CCDC110-202ENST00000393540 WDR92Q96MX6 357 aa3.59□□□□□ -1.83
CCDC110-202ENST00000393540 QRFPRQ96P65 431 aa3.59□□□□□ -1.83
CCDC110-202ENST00000393540 SH3GL1Q99961 368 aa3.59□□□□□ -1.83
CCDC110-202ENST00000393540 AIF1LQ9BQI0 150 aa3.59□□□□□ -1.83
CCDC110-202ENST00000393540 WFDC6Q9BQY6 131 aa3.59□□□□□ -1.83
CCDC110-202ENST00000393540 PHF7Q9BWX1 381 aaPredicted RBP3.59□□□□□ -1.83
CCDC110-202ENST00000393540 OSBPL11Q9BXB4 747 aa3.59□□□□□ -1.83
CCDC110-202ENST00000393540 PITHD1Q9GZP4 211 aaPredicted RBP3.59□□□□□ -1.83
CCDC110-202ENST00000393540 RBM38Q9H0Z9 239 aaKnown RBP3.59□□□□□ -1.83
CCDC110-202ENST00000393540 MAGIXQ9H6Y5 334 aa3.59□□□□□ -1.83
CCDC110-202ENST00000393540 POLMQ9NP87 494 aaPredicted RBP3.59□□□□□ -1.83
CCDC110-202ENST00000393540 PILRAQ9UKJ1 303 aa3.59□□□□□ -1.83
CCDC110-202ENST00000393540 CES1P1Q9UKY3 287 aa3.59□□□□□ -1.83
CCDC110-202ENST00000393540 NDRG2Q9UN36 371 aaKnown RBP3.59□□□□□ -1.83
CCDC110-202ENST00000393540 HS3ST3A1Q9Y663 406 aa3.59□□□□□ -1.83
CCDC110-202ENST00000393540 AP1M2Q9Y6Q5 423 aa3.59□□□□□ -1.83
CCDC110-202ENST00000393540 DGKBQ9Y6T7 804 aa3.59□□□□□ -1.83
CCDC110-202ENST00000393540 SCN2AQ99250 2005 aa3.59□□□□□ -1.84
CCDC110-202ENST00000393540 GOLGA4Q13439 2230 aaKnown RBP3.59□□□□□ -1.84
CCDC110-202ENST00000393540 KNL1Q8NG31 2342 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 A0A1W2PR48 441 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 ISM1B1AKI9 464 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 CHURC1-FNTBB4DL54 471 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 TXNDC9O14530 226 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 TNFRSF10CO14798 259 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 PGRMC2O15173 223 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 GSTA4O15217 222 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 P2RX6O15547 441 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 TNFSF14O43557 240 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 MITFO75030 526 aaPredicted RBP3.58□□□□□ -1.84
CCDC110-202ENST00000393540 NDUFS2O75306 463 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 CLEC3AO75596 197 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 MYO1DO94832 1006 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 EPN2O95208 641 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 SEMA4FO95754 770 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 RPN2P04844 631 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 SMIM10L1P0DMW3 83 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 TNFRSF1BP20333 461 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 PTGER1P34995 402 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 PCGF2P35227 344 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 POLR2IP36954 125 aaKnown RBP3.58□□□□□ -1.84
CCDC110-202ENST00000393540 PIGAP37287 484 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 RPS9P46781 194 aaKnown RBP3.58□□□□□ -1.84
CCDC110-202ENST00000393540 HSPA13P48723 471 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 CDK9P50750 372 aaKnown RBP3.58□□□□□ -1.84
CCDC110-202ENST00000393540 CCR5P51681 352 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 PPP1CAP62136 330 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 UBE2IP63279 158 aaKnown RBP3.58□□□□□ -1.84
CCDC110-202ENST00000393540 MERTKQ12866 999 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 MYBPC3Q14896 1274 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 LAPTM4AQ15012 233 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 SMAD2Q15796 467 aaKnown RBP3.58□□□□□ -1.84
CCDC110-202ENST00000393540 ZNF542PQ5EBM4 170 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 CCNYL2Q5T2Q4 361 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 TMTC4Q5T4D3 741 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 ANXA8L1Q5VT79 327 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 SAXO2Q658L1 398 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 KIAA0895LQ68EN5 471 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 LAIR1Q6GTX8 287 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 OR4C11Q6IEV9 310 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 ABHD17CQ6PCB6 329 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 IYDQ6PHW0 289 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 IKBIPQ70UQ0 350 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 CBLL1Q75N03 491 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 CCDC80Q76M96 950 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 CYP4Z1Q86W10 505 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 KRT78Q8N1N4 520 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 ARHGEF39Q8N4T4 335 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 MFSD9Q8NBP5 474 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 OR4E2Q8NGC2 313 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 PSMA8Q8TAA3 256 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 SUN3Q8TAQ9 357 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 ATOH1Q92858 354 aaPredicted RBP3.58□□□□□ -1.84
CCDC110-202ENST00000393540 UBE2E3Q969T4 207 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 FAM162AQ96A26 154 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 TAMM41Q96BW9 452 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 TBC1D20Q96BZ9 403 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 PPCDCQ96CD2 204 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 TM4SF19Q96DZ7 209 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 MTERF3Q96E29 417 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 TOE1Q96GM8 510 aaKnown RBP3.58□□□□□ -1.84
CCDC110-202ENST00000393540 SMIM10Q96HG1 83 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 VPS50Q96JG6 964 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 DPH7Q9BTV6 452 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 EFHD1Q9BUP0 239 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 C9orf16Q9BUW7 83 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 ADI1Q9BV57 179 aa3.58□□□□□ -1.84
CCDC110-202ENST00000393540 OSBPL10Q9BXB5 764 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms