RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 NPIPB7O75200 414 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ENTPD5O75356 428 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 FRAT2O75474 233 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 TAF5LO75529 589 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 RPP40O75818 363 aaKnown RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SRP72O76094 671 aaKnown RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 OR6B1O95007 311 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SNUPNO95149 360 aaKnown RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 MBD4O95243 580 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 GCNT3O95395 438 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 CPNE6O95741 557 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 TGM6O95932 706 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 MT-CYBP00156 380 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 DNTTP04053 509 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 PCCBP05166 539 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ANXA2P07355 339 aaKnown RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ADRA2AP08913 450 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 LINC00869P0C866 280 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 PNMA6AP0CW24 399 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 IGKV1-13P0DP09 117 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 LAMP1P11279 417 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 GZMAP12544 262 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 LYL1P12980 280 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ATP1B2P14415 290 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 DARSP14868 501 aaKnown RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 VEGFAP15692 232 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 PDGFRAP16234 1089 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 C4BPBP20851 252 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SPRR2DP22532 72 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 PTAFRP25105 342 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 AVPR2P30518 371 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC6A6P31641 620 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 IL2RGP31785 369 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 RPL9P32969 192 aaKnown RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ALDH3B1P43353 468 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 MAP2K4P45985 399 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC1A6P48664 564 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 CSNK1EP49674 416 aaKnown RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 GDI2P50395 445 aaKnown RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 TPMTP51580 245 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF41P51814 821 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF140P52738 457 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 NAGLUP54802 743 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SUMO3P55854 103 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 CD81P60033 236 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 C2orf54Q08AI8 447 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 DMPKQ09013 629 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SF3A3Q12874 501 aaKnown RBP eCLIP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 IFT88Q13099 833 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF154Q13106 437 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SRSF9Q13242 221 aaKnown RBP eCLIP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 PPIL2Q13356 520 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 NAE1Q13564 534 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 BYSLQ13895 437 aaKnown RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 DAG1Q14118 895 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 PDE1CQ14123 709 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 DPYSL3Q14195 570 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 PIGHQ14442 188 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ELAVL3Q14576 367 aaKnown RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC10A1Q14973 349 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 HERC3Q15034 1050 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 TTF1Q15361 905 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 NAB2Q15742 525 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 KNOP1Q1ED39 458 aaKnown RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 MICAQ29983 383 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 C2orf68Q2NKX9 166 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 EDRF1Q3B7T1 1238 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 TIGITQ495A1 244 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 C14orf28Q4W4Y0 310 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ARHGAP15Q53QZ3 475 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC35D3Q5M8T2 416 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SPOUT1Q5T280 376 aaKnown RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ATP1A1-AS1Q5TC04 95 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 EFCAB2Q5VUJ9 269 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 PDPK2PQ6A1A2 396 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ADALQ6DHV7 355 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 FAM109BQ6ICB4 259 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 OR5M10Q6IEU7 315 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 UGT3A1Q6NUS8 523 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 C1orf94Q6P1W5 598 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ABRAXAS1Q6UWZ7 409 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 C17orf99Q6UX52 265 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 KIAA1324Q6UXG2 1013 aaKnown RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SIGLEC15Q6ZMC9 328 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 KDM7AQ6ZMT4 941 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SYNE3Q6ZMZ3 975 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 RINLQ6ZS11 566 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 RNF165Q6ZSG1 346 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SND1Q7KZF4 910 aaKnown RBP eCLIP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 NUFIP2Q7Z417 695 aaKnown RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 C6orf120Q7Z4R8 191 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ZBTB46Q86UZ6 589 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SNX32Q86XE0 403 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ZDHHC21Q8IVQ6 265 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 NIM1KQ8IY84 436 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 GPR65Q8IYL9 337 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 KIAA2013Q8IYS2 634 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC22A15Q8IZD6 547 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 CDK20Q8IZL9 346 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 RASGEF1CQ8N431 466 aa-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms