RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 IGLV3-25P01717 112 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 HBQ1P09105 142 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 GPX2P18283 190 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 CDC42P60953 191 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 BTG1P62324 171 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 TAGAPQ8N103 731 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 C1orf52Q8N6N3 182 aaKnown RBP14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 KLHDC9Q8NEP7 349 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 SMARCD1Q96GM5 515 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 ELOVL6Q9H5J4 265 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 EMC7Q9NPA0 242 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 RDH8Q9NYR8 311 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 NDUFAF4Q9P032 175 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 KCMF1Q9P0J7 381 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 ZNF175Q9Y473 711 aa14.05□□□□□ -0.16
VPS9D1-201ENST00000389386 KIAA0100Q14667 2235 aaKnown RBP14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 GTPBP1O00178 669 aaKnown RBP14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 GPR182O15218 404 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 GJB3O75712 270 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 PKMP14618 531 aaKnown RBP14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 ZP3P21754 424 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 CDKN1CP49918 316 aaPredicted RBP14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 TPMTP51580 245 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 PTGES3Q15185 160 aaKnown RBP14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 ZNF284Q2VY69 593 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 LEXMQ3ZCV2 418 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 LIPKQ5VXJ0 399 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 CNIH2Q6PI25 160 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 CD300LGQ6UXG3 332 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 PTCHD4Q6ZW05 846 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 TRILQ7L0X0 811 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 LRRC17Q8N6Y2 441 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 OR52J3Q8NH60 311 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 MED28Q9H204 178 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 SLC25A19Q9HC21 320 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 MALT1Q9UDY8 824 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 NCKAP1Q9Y2A7 1128 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 NOSIPQ9Y314 301 aaKnown RBP14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 AKAP8O43823 692 aaKnown RBP14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 HAPLN1P10915 354 aaPredicted RBP14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 SDC2P34741 201 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 ACLYP53396 1101 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 MICAQ29983 383 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 C22orf42Q6IC83 251 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 TFAP2EQ6VUC0 442 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 RNF165Q6ZSG1 346 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 PDZD3Q86UT5 571 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 TMEM151BQ8IW70 566 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 LGI4Q8N135 537 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 ZNF655Q8N720 491 aaPredicted RBP14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 PTP4A1Q93096 173 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 UCN3Q969E3 161 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 LINC00052Q96N35 136 aa14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 POLR2J2Q9GZM3 115 aaKnown RBP14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 HMX1Q9NP08 348 aaPredicted RBP14.04□□□□□ -0.16
VPS9D1-201ENST00000389386 TDRD15B5MCY1 1934 aaKnown RBP14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 SMIM30A4D0T7 59 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 ADAMDEC1O15204 470 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 SUV39H1O43463 412 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 PRAMEF1O95521 474 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 MOCS2O96007 188 aaPredicted RBP14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 FGF1P05230 155 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 HOXB3P14651 431 aaPredicted RBP14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 HOXB1P14653 301 aaPredicted RBP14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 RAB14P61106 215 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 TUSC1Q2TAM9 212 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 LGALSLQ3ZCW2 172 aaPredicted RBP14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 CYP27C1Q4G0S4 372 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 ZNF730Q6ZMV8 503 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 RNF180Q86T96 592 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 ZNF280BQ86YH2 543 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 TMEM86AQ8N2M4 240 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 TEX26Q8N6G2 289 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 OR11H7Q8NGC8 314 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 OR9Q1Q8NGQ5 310 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 SGTBQ96EQ0 304 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 HMCESQ96FZ2 354 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 CLEC4MQ9H2X3 399 aaPredicted RBP14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 IFT22Q9H7X7 185 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 SLCO1C1Q9NYB5 712 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 PTTG3PQ9NZH4 202 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 GMEB2Q9UKD1 530 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 KCNMB2Q9Y691 235 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 WASH4PA8MWX3 477 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 ISM1B1AKI9 464 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 MANBAO00462 879 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 MPZL2O60487 215 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 ENTPD6O75354 484 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 CFDP00746 253 aaPredicted RBP14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 PCSK1P29120 753 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 HSPA7P48741 367 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 PPP3R1P63098 170 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 VEZF1Q14119 521 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 CTSL3PQ5NE16 218 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 LHX8Q68G74 356 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 BICRALQ6AI39 1079 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 FRMPD2BQ6IN97 320 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 MSANTD2Q6P1R3 559 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 SCN4BQ8IWT1 228 aa14.03□□□□□ -0.16
VPS9D1-201ENST00000389386 RBFAQ8N0V3 343 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms