RNA–Protein interactions for RNA: ENST00000384619.1

RNVU1-17-201, Transcript of RNA, variant U1 small nuclear 17, humanhuman

BASIC

Gene RNVU1-17, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-17-201ENST00000384619 EHD3Q9NZN3 535 aa9.4□□□□□ -0.9
RNVU1-17-201ENST00000384619 KCMF1Q9P0J7 381 aa9.4□□□□□ -0.9
RNVU1-17-201ENST00000384619 TRPC4Q9UBN4 977 aa9.4□□□□□ -0.9
RNVU1-17-201ENST00000384619 DLGAP4Q9Y2H0 992 aa9.4□□□□□ -0.9
RNVU1-17-201ENST00000384619 MSRB2Q9Y3D2 182 aa9.4□□□□□ -0.9
RNVU1-17-201ENST00000384619 ASB4Q9Y574 426 aa9.4□□□□□ -0.9
RNVU1-17-201ENST00000384619 E9PBE3 544 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 PCDH17O14917 1159 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 TMPRSS11DO60235 418 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 KLHL41O60662 606 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 RDH16O75452 317 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 DCTN3O75935 186 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 DLGAP3O95886 979 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 GBAP04062 536 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 RAB40ALP0C0E4 278 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 G6PDP11413 515 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 ZNF28P17035 718 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 CERS1P27544 350 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 OR1D4P47884 311 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 MRPL19P49406 292 aaKnown RBP9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 ATP4BP51164 291 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 CLNS1AP54105 237 aaKnown RBP9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 HSD17B7P56937 341 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 C21orf58P58505 322 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 TAS2R50P59544 299 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 RPS15P62841 145 aaKnown RBP9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 C2orf80Q0P641 193 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 NDUFAF5Q5TEU4 345 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 ZNF517Q6ZMY9 492 aaPredicted RBP9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 CA13Q8N1Q1 262 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 MIER2Q8N344 545 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 LIX1Q8N485 282 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 AMER3Q8N944 861 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 GLB1L3Q8NCI6 653 aaPredicted RBP9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 GALNT6Q8NCL4 622 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 CCDC197Q8NCU1 140 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 C10orf82Q8WW14 230 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 ZNF764Q96H86 408 aaPredicted RBP9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 MAPKAP1Q9BPZ7 522 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 EFHD1Q9BUP0 239 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 SCNM1Q9BWG6 230 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 SORBS1Q9BX66 1292 aaKnown RBP9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 GPR87Q9BY21 358 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 DPY30Q9C005 99 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 BRINP2Q9C0B6 783 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 RPF2Q9H7B2 306 aaKnown RBP9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 MIEF1Q9NQG6 463 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 SDR39U1Q9NRG7 319 aaPredicted RBP9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 ATAD3AQ9NVI7 634 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 C14orf105Q9NVL8 296 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 AIG1Q9NVV5 245 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 TAS2R7Q9NYW3 318 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 HEY2Q9UBP5 337 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 FBXW2Q9UKT8 454 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 PADI2Q9Y2J8 665 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 ATG4BQ9Y4P1 393 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 POLR3HQ9Y535 204 aaPredicted RBP9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 GPR45Q9Y5Y3 372 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 MAU2Q9Y6X3 613 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 PTPRZ1P23471 2315 aaPredicted RBP9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 RALGAPA1Q6GYQ0 2036 aa9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 RIF1Q5UIP0 2472 aaKnown RBP9.39□□□□□ -0.91
RNVU1-17-201ENST00000384619 ASCC3Q8N3C0 2202 aaKnown RBP9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 IGLV3-12A0A075B6K2 115 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 A0A1W2PR48 441 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 DYTNA2CJ06 578 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 ZNF860A6NHJ4 632 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 C21orf140B9A014 251 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 C4orf51C9J302 202 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 CYR61O00622 381 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 SLC22A2O15244 555 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 TBX19O60806 448 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 CTNSO60931 367 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 SLC22A3O75751 556 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 BMP10O95393 424 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 MED26O95402 600 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 B3GALT4O96024 378 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 FHP07954 510 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 NR2F6P10588 404 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 SDC1P18827 310 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 DDCP20711 480 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 HPCAL1P37235 193 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 XCR1P46094 333 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 DIO3P55073 304 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 SRSF11Q05519 484 aaKnown RBP9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 KLC1Q07866 573 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 ACTN3Q08043 901 aaPredicted RBP9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 LRRC74AQ0VAA2 488 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 SQLEQ14534 574 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 DPY19L1Q2PZI1 675 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 PDCD4Q53EL6 469 aaKnown RBP9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 MLIPQ5VWP3 458 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 ZNF385CQ66K41 422 aaPredicted RBP9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 FAM71E1Q6IPT2 247 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 PRSS41Q7RTY9 318 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 CACNA2D3Q8IZS8 1091 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 CPSF7Q8N684 471 aaKnown RBP9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 EFCAB3Q8N7B9 438 aa9.38□□□□□ -0.91
RNVU1-17-201ENST00000384619 VPS37AQ8NEZ2 397 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms