RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 RB1P06400 928 aa8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 CBSLP0DN79 551 aa8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 PDHA2P29803 388 aa8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 CBSP35520 551 aa8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 CTBP2P56545 445 aa8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 CAMK2GQ13555 558 aaPredicted RBP8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 GANABQ14697 944 aaKnown RBP8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 EIF4HQ15056 248 aaKnown RBP8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 USF2Q15853 346 aaPredicted RBP8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 OTUD1Q5VV17 481 aaPredicted RBP8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 C22orf42Q6IC83 251 aa8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 OR2T5Q6IEZ7 315 aa8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 TMEM135Q86UB9 458 aa8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 PDZD3Q86UT5 571 aa8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 LDLRAD3Q86YD5 345 aa8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 SERPINA12Q8IW75 414 aa8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 C11orf65Q8NCR3 313 aa8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 OR5B17Q8NGF7 314 aa8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 OR2T29Q8NH02 315 aa8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 SCARB1Q8WTV0 552 aa8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 S100PBPQ96BU1 408 aa8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 FICDQ9BVA6 458 aa8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 GORASP2Q9H8Y8 452 aa8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 SH3BP4Q9P0V3 963 aa8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 NFKBIL1Q9UBC1 381 aaPredicted RBP8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 DUSP12Q9UNI6 340 aa8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 SNED1Q8TER0 1413 aa8.18□□□□□ -1.1
NHLRC3-201ENST00000379599 LRRC14BA6NHZ5 514 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 C1orf196B1AJZ1 125 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 CLDN4O14493 209 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 LCMT2O60294 686 aaKnown RBP8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 VPS4BO75351 444 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 CDC123O75794 336 aaPredicted RBP8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 PAK4O96013 591 aaPredicted RBP8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 PBLDP30039 288 aaPredicted RBP8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 HOXA6P31267 233 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 GPR143P51810 404 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 ZNF33AQ06730 810 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 FABP9Q0Z7S8 132 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 SEZ6Q53EL9 994 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 LRRN1Q6UXK5 716 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 DEF8Q6ZN54 512 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 CRYBG2Q8N1P7 616 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 TMEM161BQ8NDZ6 487 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 B3GNT7Q8NFL0 401 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 DTD1Q8TEA8 209 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 HGDQ93099 445 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 KIAA1143Q96AT1 154 aaPredicted RBP8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 ULK4Q96C45 1275 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 C14orf144Q96I85 54 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 AMNQ9BXJ7 453 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 GSDMCQ9BYG8 508 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 REEP4Q9H6H4 257 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 CRYL1Q9Y2S2 319 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 IRAK3Q9Y616 596 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 OR2W5A6NFC9 320 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 STX11O75558 287 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 GATBO75879 557 aaKnown RBP8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 RECKO95980 971 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 GABRB1P18505 474 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 AVPR1BP47901 424 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 MEF2AQ02078 507 aaPredicted RBP8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 RIPPLY1Q0D2K3 151 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 SKP2Q13309 424 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 CELF3Q5SZQ8 465 aaKnown RBP8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 SSX6Q7RTT6 188 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 NUDT13Q86X67 352 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 DCUN1D3Q8IWE4 304 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 KDF1Q8NAX2 398 aaPredicted RBP8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 RELL2Q8NC24 303 aaPredicted RBP8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 RXFP4Q8TDU9 374 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 KCNJ9Q92806 393 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 SLC25A46Q96AG3 418 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 P2RY11Q96G91 374 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 C12orf66Q96MD2 445 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 TRIM62Q9BVG3 475 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 WDR11Q9BZH6 1224 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 C11orf49Q9H6J7 331 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 DDX31Q9H8H2 851 aaKnown RBP8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 CRLF2Q9HC73 371 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 NKIRAS2Q9NYR9 191 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 TREM2Q9NZC2 230 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 UBP1Q9NZI7 540 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 STUB1Q9UNE7 303 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 DLGAP4Q9Y2H0 992 aa8.17□□□□□ -1.1
NHLRC3-201ENST00000379599 WASH3PC4AMC7 463 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 PRR23D1E9PI22 279 aaPredicted RBP8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 RP2O75695 350 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 SCELO95171 688 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 PRR23D2P0DMB1 279 aaPredicted RBP8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 SNHG28P0DPA3 235 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 SPI1P17947 270 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 HSPA7P48741 367 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 MBTD1Q05BQ5 628 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 PDZK1IP1Q13113 114 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 FBXO48Q5FWF7 155 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 TECRLQ5HYJ1 363 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 PRR5LQ6MZQ0 368 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 ZPBP2Q6X784 338 aa8.16□□□□□ -1.1
NHLRC3-201ENST00000379599 HSDL2Q6YN16 418 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms