RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 TBC1D3DA0A087WVF3 549 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 TBC1D3IA0A087WXS9 549 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 TBC1D3EA0A087X179 549 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 TBC1D3KA0A087X1G2 549 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 TBC1D3FA6NER0 549 aaPredicted RBP18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 TBC1D3LB9A6J9 549 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 VIPP01282 170 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 CEACAM5P06731 702 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 TBC1D3HP0C7X1 549 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 CSNK1G2P78368 415 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 HYAL1Q12794 435 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 NPRL3Q12980 569 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 BNIP3Q12983 259 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 IL18R1Q13478 541 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 TBC1D3GQ6DHY5 549 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 TBC1D3CQ6IPX1 549 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 CEACAM20Q6UY09 585 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 CCDC81Q6ZN84 652 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 NUDT18Q6ZVK8 323 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 TBC1D3Q8IZP1 549 aaPredicted RBP18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 SETD9Q8NE22 299 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 MTERF3Q96E29 417 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 NRBF2Q96F24 287 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 CAMK1GQ96NX5 476 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 C17orf62Q9BQA9 187 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 WASH6PQ9NQA3 447 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 PCDHGB3Q9Y5G1 929 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 GMEB1Q9Y692 573 aa18.33■□□□□ 0.52
PCDHA4-201ENST00000378125 GLOD5A6NK44 160 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 CAPN5O15484 640 aaPredicted RBP18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 NDUFS4O43181 175 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 LAMP2P13473 410 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 POU2F1P14859 743 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 CXCR2P25025 360 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 ENTPD1P49961 510 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 GABARAPL2P60520 117 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 REEP5Q00765 189 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 EMX1Q04741 257 aaPredicted RBP18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 EEF1A2Q05639 463 aaKnown RBP18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 TOP3AQ13472 1001 aaPredicted RBP18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 KIAA1614Q5VZ46 1190 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 ZNF776Q68DI1 518 aaPredicted RBP18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 GTF2IRD2BQ6EKJ0 949 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 FAHD1Q6P587 224 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 IKBIPQ70UQ0 350 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 GTF2IRD2Q86UP8 949 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 SLC5A8Q8N695 610 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 HORMAD2Q8N7B1 307 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 ABHD11Q8NFV4 315 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 EPYCQ99645 322 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 SLC17A9Q9BYT1 436 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 ACSL5Q9ULC5 683 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 NDRG4Q9ULP0 352 aaKnown RBP18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 HEATR5BQ9P2D3 2071 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 RNGTTO60942 597 aaKnown RBP18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 IGFALSP35858 605 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 KIR2DL1P43626 348 aaPredicted RBP18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 DSTNP60981 165 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 FADDQ13158 208 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 KEAP1Q14145 624 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 NPTX1Q15818 432 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 EXOC3L2Q2M3D2 409 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 ANKRD54Q6NXT1 300 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 UBE3DQ7Z6J8 389 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 GIPC3Q8TF64 312 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 APOL4Q9BPW4 351 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 MCOLN1Q9GZU1 580 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 KLHL31Q9H511 634 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 CA5BQ9Y2D0 317 aa18.32■□□□□ 0.52
PCDHA4-201ENST00000378125 hCG_2014768A0A024R1R8 64 aa18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 PDPK1O15530 556 aa18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 KRT75O95678 551 aa18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 BCHEP06276 602 aa18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 PCMT1P22061 227 aa18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 UQCRC2P22695 453 aa18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 EIF2DP41214 584 aaKnown RBP18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 SLC19A1P41440 591 aa18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 RPS21P63220 83 aaKnown RBP18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 HPCAP84074 193 aa18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 DUSP7Q16829 419 aa18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 SPDYE7PQ495Y7 208 aa18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 TMEM196Q5HYL7 178 aa18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 ZNF540Q8NDQ6 660 aa18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 FBLIM1Q8WUP2 373 aa18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 LZICQ8WZA0 190 aa18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 OTUB1Q96FW1 271 aaPredicted RBP18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 MAGED4Q96JG8 741 aa18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 ZNF300Q96RE9 604 aaPredicted RBP18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 FUNDC2Q9BWH2 189 aa18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 TMEM38AQ9H6F2 299 aa18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 CD93Q9NPY3 652 aa18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 TSC22D4Q9Y3Q8 395 aa18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 DNMT3AQ9Y6K1 912 aaPredicted RBP18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 CCDC88CQ9P219 2028 aa18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 CCNA2P20248 432 aa18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 HTR1BP28222 390 aa18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 GP2P55259 537 aaKnown RBP18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 DLX2Q07687 328 aaPredicted RBP18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 ENPP2Q13822 863 aa18.31■□□□□ 0.52
PCDHA4-201ENST00000378125 HEPACAMQ14CZ8 416 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms