RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 MMACHCQ9Y4U1 282 aa12.48□□□□□ -0.41
CKAP2-202ENST00000378034 LAMA5O15230 3695 aa12.48□□□□□ -0.41
CKAP2-202ENST00000378034 LOC102723996A0A087X1L8 192 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 ERVH48-1M5A8F1 160 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 CLDN4O14493 209 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 CHEK2O96017 543 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 C8orf89P0DMQ9 161 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 NEFHP12036 1026 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 ACPPP15309 386 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 FOXA1P55317 472 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 HSD17B7P56937 341 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 RHAGQ02094 409 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 SLAMF1Q13291 335 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 ATP1A4Q13733 1029 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 ABRAXAS2Q15018 415 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 CHI3L2Q15782 390 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 KIRREL2Q6UWL6 708 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 TRIM46Q7Z4K8 759 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 KIRREL3Q8IZU9 778 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 CLYBLQ8N0X4 340 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 WBP1Q96G27 269 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 PRDM9Q9NQV7 894 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 A0A0A6YYD5 115 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 WDR91A4D1P6 747 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 CYR61O00622 381 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 PRMT3O60678 531 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 SASH3O75995 380 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 CHRNGP07510 517 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 HTR6P50406 440 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 WDR4P57081 412 aaKnown RBP12.47□□□□□ -0.41
CKAP2-202ENST00000378034 TBL3Q12788 808 aaKnown RBP12.47□□□□□ -0.41
CKAP2-202ENST00000378034 TTMPQ5BVD1 217 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 KANK2Q63ZY3 851 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 MRM1Q6IN84 353 aaKnown RBP12.47□□□□□ -0.41
CKAP2-202ENST00000378034 CYP20A1Q6UW02 462 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 GPR180Q86V85 440 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 TMEM151BQ8IW70 566 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 TRIM42Q8IWZ5 723 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 RAB3IL1Q8TBN0 382 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 TTC9Q92623 222 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 METTL2AQ96IZ6 378 aaKnown RBP12.47□□□□□ -0.41
CKAP2-202ENST00000378034 PAIP2Q9BPZ3 127 aaKnown RBP12.47□□□□□ -0.41
CKAP2-202ENST00000378034 SORBS1Q9BX66 1292 aaKnown RBP12.47□□□□□ -0.41
CKAP2-202ENST00000378034 MRPL1Q9BYD6 325 aaKnown RBP12.47□□□□□ -0.41
CKAP2-202ENST00000378034 ACPTQ9BZG2 426 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 SHCBP1LQ9BZQ2 653 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 TNFRSF12AQ9NP84 129 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.47□□□□□ -0.41
CKAP2-202ENST00000378034 TRAF6Q9Y4K3 522 aa12.47□□□□□ -0.41
CKAP2-202ENST00000378034 CFAP47Q6ZTR5 3102 aa12.46□□□□□ -0.41
CKAP2-202ENST00000378034 ITPR1Q14643 2758 aa12.46□□□□□ -0.41
CKAP2-202ENST00000378034 ARHGAP10A1A4S6 786 aa12.46□□□□□ -0.41
CKAP2-202ENST00000378034 B4GALT2O60909 372 aa12.46□□□□□ -0.41
CKAP2-202ENST00000378034 TLX1P31314 330 aaPredicted RBP12.46□□□□□ -0.41
CKAP2-202ENST00000378034 ABCE1P61221 599 aaKnown RBP12.46□□□□□ -0.41
CKAP2-202ENST00000378034 NSDHLQ15738 373 aa12.46□□□□□ -0.41
CKAP2-202ENST00000378034 SPIN4Q56A73 249 aa12.46□□□□□ -0.41
CKAP2-202ENST00000378034 NDUFAF7Q7L592 441 aa12.46□□□□□ -0.41
CKAP2-202ENST00000378034 OR11G2Q8NGC1 345 aa12.46□□□□□ -0.41
CKAP2-202ENST00000378034 CHTF18Q8WVB6 975 aa12.46□□□□□ -0.41
CKAP2-202ENST00000378034 MAPKAP1Q9BPZ7 522 aa12.46□□□□□ -0.41
CKAP2-202ENST00000378034 RBCK1Q9BYM8 510 aa12.46□□□□□ -0.41
CKAP2-202ENST00000378034 SIRT5Q9NXA8 310 aa12.46□□□□□ -0.41
CKAP2-202ENST00000378034 ARGFXA6NJG6 315 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 NPIPB8E9PQR5 432 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 FAM227AF5H4B4 570 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 SLC28A1O00337 649 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 GUCY1B2O75343 617 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 EEDO75530 441 aaKnown RBP12.45□□□□□ -0.42
CKAP2-202ENST00000378034 CDC123O75794 336 aaPredicted RBP12.45□□□□□ -0.42
CKAP2-202ENST00000378034 HSPA4LO95757 839 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 HPP00738 406 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 FAM58BPP0C7Q3 252 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 CPN2P22792 545 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 SERPINB3P29508 390 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 BUD31P41223 144 aaPredicted RBP12.45□□□□□ -0.42
CKAP2-202ENST00000378034 TRA2BP62995 288 aaKnown RBP12.45□□□□□ -0.42
CKAP2-202ENST00000378034 STX3Q13277 289 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 IMPG1Q17R60 797 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 DCAF10Q5QP82 559 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 SH2D4BQ5SQS7 431 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 CCNYL2Q5T2Q4 361 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 CLEC6AQ6EIG7 209 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 COMMD6Q7Z4G1 85 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 CPEB2Q7Z5Q1 589 aaKnown RBP12.45□□□□□ -0.42
CKAP2-202ENST00000378034 ANKRD37Q7Z713 158 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 SHISA5Q8N114 240 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 CLEC1AQ8NC01 280 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 LSM14AQ8ND56 463 aaKnown RBP12.45□□□□□ -0.42
CKAP2-202ENST00000378034 EXTL1Q92935 676 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 PTCHD1Q96NR3 888 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 UBL7Q96S82 380 aaPredicted RBP12.45□□□□□ -0.42
CKAP2-202ENST00000378034 HBEGFQ99075 208 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 CCT7Q99832 543 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 ARHGAP9Q9BRR9 750 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 ZNF700Q9H0M5 742 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 ING2Q9H160 280 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 ADNPQ9H2P0 1102 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 MLXIPLQ9NP71 852 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 ATP13A2Q9NQ11 1180 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms