RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 PCDH17O14917 1159 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 PDPK1O15530 556 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 PI15O43692 258 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 SDC3O75056 442 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 ZNF763Q0D2J5 394 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 AMZ1Q400G9 498 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 IFI44LQ53G44 452 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 ZNF385BQ569K4 471 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 XKR7Q5GH72 579 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 TMEM53Q6P2H8 277 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 METTL3Q86U44 580 aaKnown RBP11.17□□□□□ -0.62
DDR1-227ENST00000376570 SETD9Q8NE22 299 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 CEP295NLQ96MC4 621 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 GAL3ST1Q99999 423 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 FUNDC2Q9BWH2 189 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 NUAK2Q9H093 628 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 KAT8Q9H7Z6 458 aaKnown RBP11.17□□□□□ -0.62
DDR1-227ENST00000376570 SOHLH2Q9NX45 425 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 STON1Q9Y6Q2 735 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 SNPHO15079 494 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 KLF8O95600 359 aaPredicted RBP11.17□□□□□ -0.62
DDR1-227ENST00000376570 GTF2E2P29084 291 aaKnown RBP11.17□□□□□ -0.62
DDR1-227ENST00000376570 IFNA8P32881 189 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 TTKP33981 857 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 TAS2R41P59536 307 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 ELAVL3Q14576 367 aaKnown RBP11.17□□□□□ -0.62
DDR1-227ENST00000376570 SNAPC1Q16533 368 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 DGUOKQ16854 277 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 CCNJQ5T5M9 372 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 FAAH2Q6GMR7 532 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 FAM92BQ6ZTR7 304 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 BTLAQ7Z6A9 289 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 CARM1Q86X55 608 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 TCAIMQ8N3R3 496 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 TRAM1L1Q8N609 369 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 TCEANCQ8N8B7 351 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 GRHL3Q8TE85 626 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 TEX10Q9NXF1 929 aaPredicted RBP11.17□□□□□ -0.62
DDR1-227ENST00000376570 HS3ST2Q9Y278 367 aa11.17□□□□□ -0.62
DDR1-227ENST00000376570 BTN3A3O00478 584 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 ASNA1O43681 348 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 TLX2O43763 284 aaPredicted RBP11.16□□□□□ -0.62
DDR1-227ENST00000376570 ZNF821O75541 412 aaPredicted RBP11.16□□□□□ -0.62
DDR1-227ENST00000376570 NUDT14O95848 222 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 CCT3P49368 545 aaKnown RBP11.16□□□□□ -0.62
DDR1-227ENST00000376570 SUOXP51687 545 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 DSTNP60981 165 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 SLC14A2Q15849 920 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 SDK2Q58EX2 2172 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 ANXA8L1Q5VT79 327 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 FAM46CQ5VWP2 391 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 FCRLBQ6BAA4 426 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 DCDC5Q6ZRR9 648 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 DCP2Q8IU60 420 aaKnown RBP11.16□□□□□ -0.62
DDR1-227ENST00000376570 TMC8Q8IU68 726 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 FAM9CQ8IZT9 166 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 CADM2Q8N3J6 435 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 OR9Q1Q8NGQ5 310 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 UBASH3BQ8TF42 649 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 PMEPA1Q969W9 287 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 C1GALT1C1Q96EU7 318 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 WDR90Q96KV7 1748 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 FAM129BQ96TA1 746 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 AMBRA1Q9C0C7 1298 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 IL21RQ9HBE5 538 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 HEBP1Q9NRV9 189 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 PSME2Q9UL46 239 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 TPRP12270 2363 aaKnown RBP11.16□□□□□ -0.62
DDR1-227ENST00000376570 VCANP13611 3396 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 RAB25P57735 213 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 SLC36A3Q495N2 470 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 IGFN1Q86VF2 1251 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 P2RY8Q86VZ1 359 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 RBM12BQ8IXT5 1001 aaKnown RBP11.16□□□□□ -0.62
DDR1-227ENST00000376570 SIX5Q8N196 739 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 TERB1Q8NA31 727 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 FAM46DQ8NEK8 389 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 NDNFQ8TB73 568 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 FAR1Q8WVX9 515 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 SMARCD2Q92925 531 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 ANKRD60Q9BZ19 345 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 CEP44Q9C0F1 390 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 OR51V1Q9H2C8 321 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 SRMSQ9H3Y6 488 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 CLMPQ9H6B4 373 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 TBC1D17Q9HA65 648 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 SNTG1Q9NSN8 517 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 GPC6Q9Y625 555 aaPredicted RBP11.16□□□□□ -0.62
DDR1-227ENST00000376570 SCN5AQ14524 2016 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 SLC1A7O00341 560 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 CCNDBP1O95273 360 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 ZNF30P17039 623 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 ARL4DP49703 201 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 RPL26P61254 145 aaKnown RBP11.16□□□□□ -0.62
DDR1-227ENST00000376570 SRSF5Q13243 272 aaKnown RBP11.16□□□□□ -0.62
DDR1-227ENST00000376570 RUNX3Q13761 415 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 SYPL1Q16563 259 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 TOR1AIP1Q5JTV8 583 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 PLEKHS1Q5SXH7 462 aa11.16□□□□□ -0.62
DDR1-227ENST00000376570 MSRB3Q8IXL7 192 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms