RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 CCDC149Q6ZUS6 474 aa11.02□□□□□ -0.65
TM9SF2-201ENST00000376387 PTCHD4Q6ZW05 846 aa11.02□□□□□ -0.65
TM9SF2-201ENST00000376387 CCDC116Q8IYX3 515 aa11.02□□□□□ -0.65
TM9SF2-201ENST00000376387 CAMKK1Q8N5S9 505 aa11.02□□□□□ -0.65
TM9SF2-201ENST00000376387 YIPF7Q8N8F6 280 aa11.02□□□□□ -0.65
TM9SF2-201ENST00000376387 ZNF557Q8N988 423 aaPredicted RBP11.02□□□□□ -0.65
TM9SF2-201ENST00000376387 OR5H6Q8NGV6 325 aa11.02□□□□□ -0.65
TM9SF2-201ENST00000376387 REPS1Q96D71 796 aa11.02□□□□□ -0.65
TM9SF2-201ENST00000376387 NINQ8N4C6 2090 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 C12orf71A8MTZ7 269 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 LINC01387J3KSC0 135 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 PLA2G10O15496 165 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 FZD6O60353 706 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 ZNF623O75123 536 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 ZNF780AO75290 641 aaPredicted RBP11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 CCNB2O95067 398 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 OAZ2O95190 189 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 ETHE1O95571 254 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 GASTP01350 101 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 ATF6P18850 670 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 RPS3P23396 243 aaKnown RBP eCLIP11.01□□□□□ -0.652e-7■■■■□ 21.5
TM9SF2-201ENST00000376387 CCR7P32248 378 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 CRATP43155 626 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 RING1Q06587 406 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 MGAT3Q09327 533 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 SGCGQ13326 291 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 GLYR1Q49A26 553 aaPredicted RBP11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 CDONQ4KMG0 1287 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 FRG2Q64ET8 278 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 CERS6Q6ZMG9 384 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 ZNF366Q8N895 744 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 TMEM203Q969S6 136 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 MED30Q96HR3 178 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 FRG2BQ96QU4 278 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 DNAJC27Q9NZQ0 273 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 ACSL6Q9UKU0 697 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 LSM2Q9Y333 95 aaKnown RBP11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 TRBC1P01850 177 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 CCNYL3P0C7X3 344 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 IRF1P10914 325 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 BPIP17213 487 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 CHMP24386 653 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 RORCP51449 518 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.01□□□□□ -0.653e-6■■■■□ 23.9
TM9SF2-201ENST00000376387 HKDC1Q2TB90 917 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 DGKKQ5KSL6 1271 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 MFSD14CQ5VZR4 134 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 CXorf57Q6NSI4 855 aaKnown RBP11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 RFLNAQ6ZTI6 216 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 UBE2R2Q712K3 238 aaPredicted RBP11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 SLC34A3Q8N130 599 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 PIH1D2Q8WWB5 315 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 INTS12Q96CB8 462 aaKnown RBP11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 RIPOR3Q96MK2 946 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 DUSP26Q9BV47 211 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 CRLS1Q9UJA2 301 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 SNX7Q9UNH6 387 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 CMAHPQ9Y471 501 aa11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 LAMA2P24043 3122 aaKnown RBP11.01□□□□□ -0.65
TM9SF2-201ENST00000376387 HELZP42694 1942 aaKnown RBP11□□□□□ -0.65
TM9SF2-201ENST00000376387 PRAMEF33A0A0G2JMD5 474 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 ADAMDEC1O15204 470 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 DPM1O60762 260 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 PRAMEF10O60809 474 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 CDRT1O95170 752 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 SCG5P05408 212 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 HBQ1P09105 142 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 PRPH2P23942 346 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 CTXN3Q4LDR2 81 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 LIPKQ5VXJ0 399 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 TSPAN33Q86UF1 283 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 RDH10Q8IZV5 341 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 AQP11Q8NBQ7 271 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 P2RY13Q9BPV8 354 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 SLC22A4Q9H015 551 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 RDH14Q9HBH5 336 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 ACER3Q9NUN7 267 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 YARS2Q9Y2Z4 477 aaKnown RBP11□□□□□ -0.65
TM9SF2-201ENST00000376387 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11□□□□□ -0.65
TM9SF2-201ENST00000376387 TRAV19A0A0A6YYK7 116 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 SOX14O95416 240 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 IGHA2P01877 340 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 ANXA8P13928 327 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 RAC2P15153 192 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 MAPK1P28482 360 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 GPC1P35052 558 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 RPS5P46782 204 aaKnown RBP11□□□□□ -0.65
TM9SF2-201ENST00000376387 SEC13P55735 322 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 CAV3P56539 151 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 SRSF11Q05519 484 aaKnown RBP11□□□□□ -0.65
TM9SF2-201ENST00000376387 HSPA14Q0VDF9 509 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 CHIT1Q13231 466 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 ZNF177Q13360 481 aaPredicted RBP11□□□□□ -0.65
TM9SF2-201ENST00000376387 MRPL58Q14197 206 aaKnown RBP11□□□□□ -0.65
TM9SF2-201ENST00000376387 LARS2Q15031 903 aaKnown RBP11□□□□□ -0.65
TM9SF2-201ENST00000376387 SAXO2Q658L1 398 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 TMIGD1Q6UXZ0 262 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 OR4K1Q8NGD4 311 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 OR8J2Q8NGG1 315 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 NFKBIDQ8NI38 313 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms