RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 WEE1P30291 646 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 PXNP49023 591 aaPredicted RBP12.38□□□□□ -0.43
MSH5-204ENST00000375755 CLDN8P56748 225 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 RFLNAQ6ZTI6 216 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 ZNF767PQ75MW2 155 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 TSPAN33Q86UF1 283 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 GLCCI1Q86VQ1 547 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 KRT73Q86Y46 540 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 PGBD3Q8N328 593 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 ESX1Q8N693 406 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 DCAF4L2Q8NA75 395 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 OR4M2Q8NGB6 313 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 PIH1D2Q8WWB5 315 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 SORCS1Q8WY21 1168 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 CCDC120Q96HB5 630 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 HHATLQ9HCP6 504 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 KLHL21Q9UJP4 597 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 LINC01553A4QN01 128 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 CLDN7O95471 211 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 C1QBP02746 253 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 RHOP08100 348 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 ENGP17813 658 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 PXDC1Q5TGL8 231 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 SAXO2Q658L1 398 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 FAM151BQ6UXP7 276 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 GRASPQ7Z6J2 395 aaPredicted RBP12.38□□□□□ -0.43
MSH5-204ENST00000375755 TSEN54Q7Z6J9 526 aaKnown RBP12.38□□□□□ -0.43
MSH5-204ENST00000375755 FBXL6Q8N531 539 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 CAMKK1Q8N5S9 505 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 CDCA4Q9BXL8 241 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 B3GNT4Q9C0J1 378 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 NIPAL2Q9H841 368 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 DIABLOQ9NR28 239 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 DUSP12Q9UNI6 340 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 CMAHPQ9Y471 501 aa12.38□□□□□ -0.43
MSH5-204ENST00000375755 CLIC1O00299 241 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 STX7O15400 261 aaKnown RBP12.37□□□□□ -0.43
MSH5-204ENST00000375755 SOX3P41225 446 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 RORCP51449 518 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 CLCN7P51798 805 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 CRYBA2P53672 197 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 KCNJ10P78508 379 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 CSTF3Q12996 717 aaKnown RBP12.37□□□□□ -0.43
MSH5-204ENST00000375755 QPRTQ15274 297 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 C12orf76Q8N812 135 aaPredicted RBP12.37□□□□□ -0.43
MSH5-204ENST00000375755 FAM181AQ8N9Y4 354 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 DENND6BQ8NEG7 585 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 WDR36Q8NI36 951 aaKnown RBP12.37□□□□□ -0.43
MSH5-204ENST00000375755 C9orf43Q8TAL5 461 aaPredicted RBP12.37□□□□□ -0.43
MSH5-204ENST00000375755 KCNJ9Q92806 393 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 NIPSNAP1Q9BPW8 284 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 BOCQ9BWV1 1114 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 ADGRE3Q9BY15 652 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 MIXL1Q9H2W2 232 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 MTG2Q9H4K7 406 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 ZNF556Q9HAH1 456 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 ABCB9Q9NP78 766 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 SLC23A1Q9UHI7 598 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 HSPB11Q9Y547 144 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 PCDHGB3Q9Y5G1 929 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 TRIOO75962 3097 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 LOC730098B7Z3J9 87 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 ZNF30P17039 623 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 ALAS2P22557 587 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 CHMP24386 653 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 POU6F2P78424 691 aaPredicted RBP12.37□□□□□ -0.43
MSH5-204ENST00000375755 GPR19Q15760 415 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 TATDN3Q17R31 274 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.37□□□□□ -0.43
MSH5-204ENST00000375755 CREB3L2Q70SY1 520 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 SDR16C5Q8N3Y7 309 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 GALNT6Q8NCL4 622 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 MYO19Q96H55 970 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 LMLNQ96KR4 655 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 LRRC3BQ96PB8 259 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 ACPTQ9BZG2 426 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 GPR63Q9BZJ6 419 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 RETREG1Q9H6L5 497 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 C12orf4Q9NQ89 552 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 PRKAG2Q9UGJ0 569 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 ALG5Q9Y673 324 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 WNT6Q9Y6F9 365 aa12.37□□□□□ -0.43
MSH5-204ENST00000375755 WDR47O94967 919 aa12.36□□□□□ -0.43
MSH5-204ENST00000375755 LATS1O95835 1130 aa12.36□□□□□ -0.43
MSH5-204ENST00000375755 SRCP12931 536 aa12.36□□□□□ -0.43
MSH5-204ENST00000375755 SSTR4P31391 388 aa12.36□□□□□ -0.43
MSH5-204ENST00000375755 HNF1BP35680 557 aa12.36□□□□□ -0.43
MSH5-204ENST00000375755 PPIGQ13427 754 aaKnown RBP eCLIP12.36□□□□□ -0.435e-7■■■■□ 21.7
MSH5-204ENST00000375755 MPPE1Q53F39 396 aa12.36□□□□□ -0.43
MSH5-204ENST00000375755 TIGD3Q6B0B8 471 aa12.36□□□□□ -0.43
MSH5-204ENST00000375755 OR10G2Q8NGC3 310 aa12.36□□□□□ -0.43
MSH5-204ENST00000375755 C2orf49Q9BVC5 232 aaPredicted RBP12.36□□□□□ -0.43
MSH5-204ENST00000375755 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.36□□□□□ -0.43
MSH5-204ENST00000375755 IMPAD1Q9NX62 359 aa12.36□□□□□ -0.43
MSH5-204ENST00000375755 FADS2P1A8MWK0 482 aa12.36□□□□□ -0.43
MSH5-204ENST00000375755 TNFRSF11BO00300 401 aa12.36□□□□□ -0.43
MSH5-204ENST00000375755 GAPDHSO14556 408 aaPredicted RBP12.36□□□□□ -0.43
MSH5-204ENST00000375755 TSPAN9O75954 239 aa12.36□□□□□ -0.43
MSH5-204ENST00000375755 CYP17A1P05093 508 aa12.36□□□□□ -0.43
MSH5-204ENST00000375755 GPC1P35052 558 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms