RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 DAPP1Q9UN19 280 aa13.28□□□□□ -0.28
NELFE-201ENST00000375425 PPIEQ9UNP9 301 aaKnown RBP13.28□□□□□ -0.28
NELFE-201ENST00000375425 ADGRG4Q8IZF6 3080 aa13.27□□□□□ -0.28
NELFE-201ENST00000375425 CSMD2Q7Z408 3487 aa13.27□□□□□ -0.28
NELFE-201ENST00000375425 ZNHIT1O43257 154 aa13.27□□□□□ -0.29
NELFE-201ENST00000375425 CTNSO60931 367 aa13.27□□□□□ -0.29
NELFE-201ENST00000375425 ITGA10O75578 1167 aa13.27□□□□□ -0.29
NELFE-201ENST00000375425 SLC35E2BP0CK96 405 aa13.27□□□□□ -0.29
NELFE-201ENST00000375425 TFEBP19484 476 aa13.27□□□□□ -0.29
NELFE-201ENST00000375425 CERS1P27544 350 aa13.27□□□□□ -0.29
NELFE-201ENST00000375425 GRNP28799 593 aaKnown RBP13.27□□□□□ -0.29
NELFE-201ENST00000375425 CRABP2P29373 138 aa13.27□□□□□ -0.29
NELFE-201ENST00000375425 ETF1P62495 437 aaKnown RBP13.27□□□□□ -0.29
NELFE-201ENST00000375425 TGM3Q08188 693 aa13.27□□□□□ -0.29
NELFE-201ENST00000375425 SLMAPQ14BN4 828 aa13.27□□□□□ -0.29
NELFE-201ENST00000375425 TBCCQ15814 346 aa13.27□□□□□ -0.29
NELFE-201ENST00000375425 PAGE2BQ5JRK9 111 aa13.27□□□□□ -0.29
NELFE-201ENST00000375425 ZDHHC24Q6UX98 284 aa13.27□□□□□ -0.29
NELFE-201ENST00000375425 SYT10Q6XYQ8 523 aa13.27□□□□□ -0.29
NELFE-201ENST00000375425 Q6ZPB1 254 aaPredicted RBP13.27□□□□□ -0.29
NELFE-201ENST00000375425 UBE3DQ7Z6J8 389 aa13.27□□□□□ -0.29
NELFE-201ENST00000375425 CLNKQ7Z7G1 428 aa13.27□□□□□ -0.29
NELFE-201ENST00000375425 TICAM1Q8IUC6 712 aa13.27□□□□□ -0.29
NELFE-201ENST00000375425 SULF2Q8IWU5 870 aa13.27□□□□□ -0.29
NELFE-201ENST00000375425 TMEM156Q8N614 296 aa13.27□□□□□ -0.29
NELFE-201ENST00000375425 NCLNQ969V3 563 aa13.27□□□□□ -0.29
NELFE-201ENST00000375425 VMP1Q96GC9 406 aa13.27□□□□□ -0.29
NELFE-201ENST00000375425 PHACTR1Q9C0D0 580 aa13.27□□□□□ -0.29
NELFE-201ENST00000375425 RAB17Q9H0T7 212 aa13.27□□□□□ -0.29
NELFE-201ENST00000375425 NMRAL1Q9HBL8 299 aa13.27□□□□□ -0.29
NELFE-201ENST00000375425 KCMF1Q9P0J7 381 aa13.27□□□□□ -0.29
NELFE-201ENST00000375425 ZNF223Q9UK11 482 aaPredicted RBP13.27□□□□□ -0.29
NELFE-201ENST00000375425 KLF2Q9Y5W3 355 aaPredicted RBP13.27□□□□□ -0.29
NELFE-201ENST00000375425 MYO9AB2RTY4 2548 aa13.26□□□□□ -0.29
NELFE-201ENST00000375425 MYOCOSA0A1B0GUC4 107 aa13.26□□□□□ -0.29
NELFE-201ENST00000375425 PRKNO60260 465 aaPredicted RBP13.26□□□□□ -0.29
NELFE-201ENST00000375425 IFNA16P05015 189 aa13.26□□□□□ -0.29
NELFE-201ENST00000375425 PRF1P14222 555 aa13.26□□□□□ -0.29
NELFE-201ENST00000375425 ZNF24P17028 368 aa13.26□□□□□ -0.29
NELFE-201ENST00000375425 STX2P32856 288 aa13.26□□□□□ -0.29
NELFE-201ENST00000375425 CASP2P42575 452 aa13.26□□□□□ -0.29
NELFE-201ENST00000375425 HSF1Q00613 529 aa13.26□□□□□ -0.29
NELFE-201ENST00000375425 RCN2Q14257 317 aa13.26□□□□□ -0.29
NELFE-201ENST00000375425 EFTUD2Q15029 972 aaKnown RBP eCLIP13.26□□□□□ -0.295e-7■■■■■ 36.5
NELFE-201ENST00000375425 XKRXQ6PP77 449 aa13.26□□□□□ -0.29
NELFE-201ENST00000375425 RPTNQ6XPR3 784 aa13.26□□□□□ -0.29
NELFE-201ENST00000375425 LRRC70Q7Z2Q7 622 aa13.26□□□□□ -0.29
NELFE-201ENST00000375425 MDGA2Q7Z553 956 aa13.26□□□□□ -0.29
NELFE-201ENST00000375425 TBC1D1Q86TI0 1168 aaPredicted RBP13.26□□□□□ -0.29
NELFE-201ENST00000375425 GHDCQ8N2G8 530 aa13.26□□□□□ -0.29
NELFE-201ENST00000375425 TMEM132CQ8N3T6 1108 aa13.26□□□□□ -0.29
NELFE-201ENST00000375425 SRFBP1Q8NEF9 429 aaKnown RBP13.26□□□□□ -0.29
NELFE-201ENST00000375425 KCNC2Q96PR1 638 aa13.26□□□□□ -0.29
NELFE-201ENST00000375425 ATOH8Q96SQ7 321 aa13.26□□□□□ -0.29
NELFE-201ENST00000375425 CCDC77Q9BR77 488 aa13.26□□□□□ -0.29
NELFE-201ENST00000375425 ALOXE3Q9BYJ1 711 aa13.26□□□□□ -0.29
NELFE-201ENST00000375425 LIN28AQ9H9Z2 209 aaKnown RBP13.26□□□□□ -0.29
NELFE-201ENST00000375425 PRM3Q9NNZ6 103 aa13.26□□□□□ -0.29
NELFE-201ENST00000375425 ADAP2Q9NPF8 381 aa13.26□□□□□ -0.29
NELFE-201ENST00000375425 IGSF5Q9NSI5 407 aa13.26□□□□□ -0.29
NELFE-201ENST00000375425 CLCA3PQ9Y6N3 262 aa13.26□□□□□ -0.29
NELFE-201ENST00000375425 SUPT3HB4E1H0 165 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 KLRC4-KLRK1H3BQV0 150 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 UBXN8O00124 270 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 SH3BGRLO75368 114 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 SUPT3HO75486 399 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 ZFAND5O76080 213 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 TGFB1P01137 390 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 LTA4HP09960 611 aaKnown RBP13.25□□□□□ -0.29
NELFE-201ENST00000375425 HTR1EP28566 365 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 RFC3P40938 356 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 MSH2P43246 934 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 MEOX1P50221 254 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 ADORA2A-AS1P86434 159 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 STX4Q12846 297 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 BMPR2Q13873 1038 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 E2F2Q14209 437 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 ELAVL1Q15717 326 aaKnown RBP13.25□□□□□ -0.29
NELFE-201ENST00000375425 ZNF793Q6ZN11 406 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 BNC2Q6ZN30 1099 aaPredicted RBP13.25□□□□□ -0.29
NELFE-201ENST00000375425 C16orf47Q6ZP98 133 aaPredicted RBP13.25□□□□□ -0.29
NELFE-201ENST00000375425 CHERPQ8IWX8 916 aaKnown RBP13.25□□□□□ -0.29
NELFE-201ENST00000375425 SRRM1Q8IYB3 904 aaKnown RBP13.25□□□□□ -0.29
NELFE-201ENST00000375425 CYP4Z2PQ8N1L4 340 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 ACOT4Q8N9L9 421 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 ZNF473Q8WTR7 871 aaKnown RBP13.25□□□□□ -0.29
NELFE-201ENST00000375425 UBE2E3Q969T4 207 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 NXNL1Q96CM4 212 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 MAPKAP1Q9BPZ7 522 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 TBCDQ9BTW9 1192 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 LYRM4Q9HD34 91 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 NUDT4Q9NZJ9 180 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 VTI1BQ9UEU0 232 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 KLF13Q9Y2Y9 288 aaPredicted RBP13.25□□□□□ -0.29
NELFE-201ENST00000375425 YARS2Q9Y2Z4 477 aaKnown RBP13.25□□□□□ -0.29
NELFE-201ENST00000375425 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.25□□□□□ -0.29
NELFE-201ENST00000375425 AKAP9Q99996 3911 aa13.25□□□□□ -0.29
NELFE-201ENST00000375425 TMEM200CA6NKL6 621 aa13.24□□□□□ -0.29
NELFE-201ENST00000375425 K7EPI3 171 aa13.24□□□□□ -0.29
NELFE-201ENST00000375425 RTCAO00442 366 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms